| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_34930 |
|---|
| Symbol | |
|---|
| ID | 4385332 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 3108760 |
|---|
| End bp | 3109725 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 639325374 |
|---|
| Product | putative phycobiliprotein |
|---|
| Protein accession | YP_790943 |
|---|
| Protein GI | 116050240 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1413] FOG: HEAT repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0000000000771282 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 0.964295 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTGTG AAAACGCCAC CCTGCCCGAA ATCCTCGAAC TGTCGCCGCG CCTGGAGGAC
GCCGATCCCG GCGTGCGTCG CCTGGCGCTG ATCGAACTGG CCGACCTGGA GCTGCCGGAG
GCGCTGCCGT TGCTGGTTGC GGCCCTGCGC GGCGATCCCG ACCCCGGCGT GCGCGGCGAG
GCCGCGCGCC TGCTGGAGGC CTGGGAGGAA GACGCAGTGG TCGATGCGCT TTGCGCGGCC
CTGGCCGATC CGCTGCCGGC GGTGGCCGAG GCCGCCGCGC AGAGCCTTGG CGAACTCAAG
GAACCGGCCG CCGGGCGGCG CCTGCTGCCG TGGCTCGAGC ATGCCGATGC CTTCGTCCGT
GCCAGCGTAT TGCGTGCGTT GCGCGAACTG CGCCTGGAGG AAAGCGCCGC ACCGGCCCTG
GCCGCCCTCG GTGACCCGCA GGCGGCGGTG CGCCGCGAGG CGGTGGCGGT GCTCGGCTGG
CTCCGCCACC AGCCGGCCCT GGCCGAACTG GCCAGGCTGG CTAGCGCCGA TGTCGACCCG
GAGGTACGCC GGGCGGCCAC CGGCGCCCTC GGCCTGAGCC GCGAGGTGAC GGTGCTGCCG
GCGCTCTGCG CGGCGCTGGC GGACGCTCAA TGGCAGGTTC GCGAAGAGGC GGCGACGACC
CTTGGCAAGC TGGGCCGGGA GGAGGCCGGC GAGCCGCTGC TGAAGGCCCT GGCGGACGAC
TACTGGCAGG TCCGCCTGCG CGCCGCGCGG TCGCTCGGGC GCTTGCGCCA CCGCCCGGCG
CGGGAGGCGC TGGAAGCATT GCTCGGCCAT CCCATCGGCA ACCTGCGCAA GGAGGCCGCC
CTGGCCCTCG GCGAACTGGC GGACCCGGCC TCGGCCCAGG CCTTGCGGGT CGCCGAAGGC
GACGGCGATC CCGAGGTGCG CAAGGCGGTG CGCATCGCCC TGGGGCAACT GCGGGTGCCG
GCATGA
|
|---|
| Protein sequence | MTCENATLPE ILELSPRLED ADPGVRRLAL IELADLELPE ALPLLVAALR GDPDPGVRGE
AARLLEAWEE DAVVDALCAA LADPLPAVAE AAAQSLGELK EPAAGRRLLP WLEHADAFVR
ASVLRALREL RLEESAAPAL AALGDPQAAV RREAVAVLGW LRHQPALAEL ARLASADVDP
EVRRAATGAL GLSREVTVLP ALCAALADAQ WQVREEAATT LGKLGREEAG EPLLKALADD
YWQVRLRAAR SLGRLRHRPA REALEALLGH PIGNLRKEAA LALGELADPA SAQALRVAEG
DGDPEVRKAV RIALGQLRVP A
|
|---|
| |