Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_33540 |
Symbol | |
ID | 4380470 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 2951026 |
End bp | 2951931 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639325265 |
Product | putative permease of ABC transporter |
Protein accession | YP_790834 |
Protein GI | 116050349 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.00783017 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.0257803 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGACG CCTACGAACA ACTGCGCCAG GCCGTCCAGG CCTGGGCCGC CGCCGGCTAC CTGCCGGAGA CCCTGGCCTA CGGCTTCGTC GTCAACGCGC TCCTCGCCGG CCTGCTGATC GGCCCGGTGC TCGGCGGCCT CGGCACCCTG GTGGTGGTCA AGCGCTTCGC CTTCTTCTCC GAGGCGGTCG GCCACGCCGC GCTCACCGGC GTGGCCATCG GCATCCTCCT CGGCGAGCCC TACACCGGGC CCTACGGCAG CCTGTTCGGC TACTGCCTGC TGTTCGGCGT CCTGCTCAAC TACCTGCGCA ACCGCACCGG CCTGGCCCCG GACACCCTGA TCGGGGTGTT CCTCTCGGTG TCCCTGGCGC TCGGCGCCAG CCTGCTGCTG GTGCTGGCGG GCAAGATCAA CGTGCATATC CTCGAGAACG TGCTGTTCGG CTCGGTGCTG ACCGTGAACG GCCATGACCT CGCGGTGCTG GCGGCGGTCG CCGTGCTGGT GCCGTGCCTG GCCCTGCCGC TGTACAACCG CATCATGCTG GCCAGCTTCA ACCCGCAACT GGCGGCGGTG CGCGGGGTCG CGGTGAAGAG CCTGGACTAC CTGTTCGTGG CCCTGGTGAC CCTGGTCACC GTCGCCGCGG TGAAAGTGAT CGGCGCGATC CTGGTCGGTG CCCTGCTGGT GATCCCGGCG GCGGCGGCGC GCCTGGTTAG CCAGTCGCTG AAAGGGTTCT TCTGGCTGGC GGTGCTGATC GCCACCGTCA GCACGCTGGC CGGTATCCTG CTGCCGATCA TGTTCGACCT GCCGATTCCC TCCGGCGCCG CGATCATCCT GGTCGCCGGC CTGGCCTTCG GCCTCGCCGC CATCGCTCGC GGCTGCCTGC CGCACCTGAA AGGAACCCCC GGATGA
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Protein sequence | MNDAYEQLRQ AVQAWAAAGY LPETLAYGFV VNALLAGLLI GPVLGGLGTL VVVKRFAFFS EAVGHAALTG VAIGILLGEP YTGPYGSLFG YCLLFGVLLN YLRNRTGLAP DTLIGVFLSV SLALGASLLL VLAGKINVHI LENVLFGSVL TVNGHDLAVL AAVAVLVPCL ALPLYNRIML ASFNPQLAAV RGVAVKSLDY LFVALVTLVT VAAVKVIGAI LVGALLVIPA AAARLVSQSL KGFFWLAVLI ATVSTLAGIL LPIMFDLPIP SGAAIILVAG LAFGLAAIAR GCLPHLKGTP G
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