Gene PA14_33540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_33540 
Symbol 
ID4380470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2951026 
End bp2951931 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content70% 
IMG OID639325265 
Productputative permease of ABC transporter 
Protein accessionYP_790834 
Protein GI116050349 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.00783017 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.0257803 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACG CCTACGAACA ACTGCGCCAG GCCGTCCAGG CCTGGGCCGC CGCCGGCTAC 
CTGCCGGAGA CCCTGGCCTA CGGCTTCGTC GTCAACGCGC TCCTCGCCGG CCTGCTGATC
GGCCCGGTGC TCGGCGGCCT CGGCACCCTG GTGGTGGTCA AGCGCTTCGC CTTCTTCTCC
GAGGCGGTCG GCCACGCCGC GCTCACCGGC GTGGCCATCG GCATCCTCCT CGGCGAGCCC
TACACCGGGC CCTACGGCAG CCTGTTCGGC TACTGCCTGC TGTTCGGCGT CCTGCTCAAC
TACCTGCGCA ACCGCACCGG CCTGGCCCCG GACACCCTGA TCGGGGTGTT CCTCTCGGTG
TCCCTGGCGC TCGGCGCCAG CCTGCTGCTG GTGCTGGCGG GCAAGATCAA CGTGCATATC
CTCGAGAACG TGCTGTTCGG CTCGGTGCTG ACCGTGAACG GCCATGACCT CGCGGTGCTG
GCGGCGGTCG CCGTGCTGGT GCCGTGCCTG GCCCTGCCGC TGTACAACCG CATCATGCTG
GCCAGCTTCA ACCCGCAACT GGCGGCGGTG CGCGGGGTCG CGGTGAAGAG CCTGGACTAC
CTGTTCGTGG CCCTGGTGAC CCTGGTCACC GTCGCCGCGG TGAAAGTGAT CGGCGCGATC
CTGGTCGGTG CCCTGCTGGT GATCCCGGCG GCGGCGGCGC GCCTGGTTAG CCAGTCGCTG
AAAGGGTTCT TCTGGCTGGC GGTGCTGATC GCCACCGTCA GCACGCTGGC CGGTATCCTG
CTGCCGATCA TGTTCGACCT GCCGATTCCC TCCGGCGCCG CGATCATCCT GGTCGCCGGC
CTGGCCTTCG GCCTCGCCGC CATCGCTCGC GGCTGCCTGC CGCACCTGAA AGGAACCCCC
GGATGA
 
Protein sequence
MNDAYEQLRQ AVQAWAAAGY LPETLAYGFV VNALLAGLLI GPVLGGLGTL VVVKRFAFFS 
EAVGHAALTG VAIGILLGEP YTGPYGSLFG YCLLFGVLLN YLRNRTGLAP DTLIGVFLSV
SLALGASLLL VLAGKINVHI LENVLFGSVL TVNGHDLAVL AAVAVLVPCL ALPLYNRIML
ASFNPQLAAV RGVAVKSLDY LFVALVTLVT VAAVKVIGAI LVGALLVIPA AAARLVSQSL
KGFFWLAVLI ATVSTLAGIL LPIMFDLPIP SGAAIILVAG LAFGLAAIAR GCLPHLKGTP
G