Gene PA14_33330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_33330 
Symbol 
ID4380506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2930093 
End bp2931397 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content62% 
IMG OID639325248 
Producthypothetical protein 
Protein accessionYP_790817 
Protein GI116050366 
COG category 
COG ID 
TIGRFAM ID[TIGR02564] CRISPR-associated protein, Csy1 family 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.0199873 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCTC CCCTCCCAAC GCCTACGTGG CAGGAGCTTC GCCAGTTCAT CGAATCCTTC 
ATCCAGGAGC GCCTCCAGGG CAAGCTGGAC AAACTCCAAC CCGACGAAGA CGACAAGCGC
CAGACATTGC TGGCCACCCA CCGGCGGGAG GCCTGGCTGG CCGATGCCGC CCGGCGGGTT
GGCCAGTTGC AGTTGGTGAC CCACACGCTC AAGCCGATCC ATCCCGACGC CCGCGGCAGC
AACCTGCACA GCCTGCCGCA AGCACCCGGC CAACCGGGCC TCGCCGGTTC CCATGAGCTA
GGTGACAGGC TGGTCAGCGA TGTGGTGGGC AATGCCGCGG CGCTGGACGT ATTCAAGTTT
CTCAGTCTCC AGTATCAGGG TAAAAATCTT CTGAACTGGC TGACAGAAGA CAGTGCCGAG
GCATTACAGG CGCTGTCCGA TAACGCCGAA CAGGCTCGCG AATGGCGGCA AGCGTTCATC
GGCATCACGA CCGTCAAAGG CGCTCCCGCG TCCCACAGCC TGGCCAAGCA GTTGTACTTT
CCCCTGCCCG GTTCCGGCTA CCACCTGCTA GCACCGCTGT TTCCCACCAG TCTGGTGCAT
CACGTCCACG CTCTGCTCCG CGAAGCGCGC TTCGGCGACG CGGCCAAGGC GGCACGCGAA
GCGCGCAGCC GCCAGGAGTC ATGGCCCCAC GGATTCAGCG AGTACCCCAA CCTGGCGATC
CAGAAGTTCG GCGGTACCAA GCCGCAGAAC ATCAGTCAGT TGAACAACGA GCGCCGTGGC
GAGAACTGGT TGCTGCCATC GCTTCCGCCG AACTGGCAAA GGCAGAATGT AAACGCGCCG
ATGCGGCACT CTTCGGTCTT CGAGCATGAC TTCGGAAGAA CTCCTGAAGT ATCCCGCCTA
ACCCGTACCC TGCAGCGTTT TCTTGCCAAG ACAGTCCATA ACAACCTCGC CATCCGCCAG
CGGCGTGCCC AATTGGTGGC GCAAATCTGC GACGAAGCCC TGCAATACGC CGCCCGTCTG
CGCGAACTGG AGCCCGGCTG GAGCGCAACC CCCGGGTGCC AACTGCATGA CGCGGAGCAG
CTCTGGCTCG ATCCGTTGCG CGCACAGACC GATGAGACGT TCTTGCAGCG CCGACTACGA
GGTGACTGGC CTGCCGAGGT CGGAAATCGC TTCGCCAACT GGCTGAACCG GGCGGTCAGC
AGCGACAGTC AGATACTGGG TAGCCCGGAA GCCGCCCAAT GGAGCCAGGA GCTGAGCAAG
GAACTGACGA TGTTCAAGGA GATACTCGAA GATGAGCGTG ACTGA
 
Protein sequence
MTSPLPTPTW QELRQFIESF IQERLQGKLD KLQPDEDDKR QTLLATHRRE AWLADAARRV 
GQLQLVTHTL KPIHPDARGS NLHSLPQAPG QPGLAGSHEL GDRLVSDVVG NAAALDVFKF
LSLQYQGKNL LNWLTEDSAE ALQALSDNAE QAREWRQAFI GITTVKGAPA SHSLAKQLYF
PLPGSGYHLL APLFPTSLVH HVHALLREAR FGDAAKAARE ARSRQESWPH GFSEYPNLAI
QKFGGTKPQN ISQLNNERRG ENWLLPSLPP NWQRQNVNAP MRHSSVFEHD FGRTPEVSRL
TRTLQRFLAK TVHNNLAIRQ RRAQLVAQIC DEALQYAARL RELEPGWSAT PGCQLHDAEQ
LWLDPLRAQT DETFLQRRLR GDWPAEVGNR FANWLNRAVS SDSQILGSPE AAQWSQELSK
ELTMFKEILE DERD