| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_31900 |
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| Symbol | |
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| ID | 4383023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 2776460 |
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| End bp | 2779570 |
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| Gene Length | 3111 bp |
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| Protein Length | 1036 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639325142 |
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| Product | putative efflux transporter |
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| Protein accession | YP_790711 |
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| Protein GI | 116050470 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.329836 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTGT CCACGCCCTT CATCCGCCGC CCGGTCGCCA CCACGCTGCT GACCCTGGCG
TTGCTGCTGG CCGGCACCCT GTCGTTCGGT CTGCTGCCGG TGGCGCCGCT GCCCAACGTC
GATTTTCCGG CCATCGTGGT CAGCGCCAGC CTGCCGGGCG CCAGCCCGGA AACCATGGCC
TCGTCGGTGG CCACGCCGCT GGAGCGCTCG CTGGGACGGA TCGCCGGGAT CAGCGAGATG
ACCTCCAGCA GTTCGCTGGG CTCGACCACC GTGGTGCTCG TGTTCGACCT GGAGAAGGAC
ATCGACGGCG CCGCCCGCGA GGTGCAGGCG GCGATCAACG GCGCGATGAG CCTGCTGCCC
AGCGGCATGC CGAACAATCC CAGCTACCGC AAGGCCAACC CCTCGGACAT GCCGATCATG
GTCCTCACCC TGACCTCGGA GACCCAGAGT CGCGGCGAGA TGTACGACCT CGCCTCGACC
GTGCTGGCGC CGAAGCTGTC GCAGGTGCAG GGGGTAGGGC AGGTGAGCAT CGGCGGCAGC
TCGCTGCCGG CGGTGCGGGT CGACCTCAAC CCGGATGCCA TGAGCCAGTA CGGGCTGTCC
CTGGACAGCG TGCGCACGGC CATCGCCGCG GCCAACAGCA ACGGCCCCAA GGGCGCCGTC
GAGAAGGACG ACAAGCACTG GCAGGTGGAC GCCAACGACC AGTTGCGCAA GGCCCGCGAG
TACGAGCCGC TGGTGATCCA CTACAACGCC GACAACGGCG CCGCGGTGCG CCTCGGCGAC
GTGGCCAAGG TCAGCGACTC GGTGGAGGAC GTGCGCAACG CCGGCTTCTC CGACGACCTG
CCGGCGGTGC TGCTGATCGT CACCCGCCAG CCCGGCGCCA ACATCATCGA GGCCACCGAC
GCCATCCACG CGCAACTGCC GGTGTTGCAG GAACTGCTCG GGCCGCAGGT CAAGCTGAAC
GTGATGGATG ATCGCAGCCC GTCGATCCGC GCGTCGCTGG AAGAGGCCGA GCTGACCCTG
CTGATCTCGG TGGCGCTGGT GATCCTGGTG GTCTTCCTGT TCCTGCGCAA CGGCCGCGCC
ACGCTGATCC CCAGCCTGGC GGTGCCGGTC TCGCTGATCG GCACCTTCGC GGTCATGTAC
CTGTGCGACT TCAGCCTGAA CAACCTGTCG CTGATGGCGC TGATCATCGC CACCGGCTTC
GTGGTGGACG ACGCCATTGT GGTGGTGGAA AACATCGCCC GACGCATCGA GGAGGGCGAT
CCGCCGATCC AGGCGGCGAT CACCGGCGCC CGCCAGGTCG GTTTCACCGT GTTGTCGATG
ACGCTCTCGC TGGTCGCGGT GTTCATCCCG CTGCTGCTCA TGGGCGGCCT CACCGGGCGG
TTGTTCCGCG AGTTCGCGGT GACTCTCTCG GCGGCGATCC TGGTGTCCCT GGTGGTATCC
CTGACCCTCA CGCCGATGCT CTGCGCGCGT CTGCTGCGTC CGCTGAAACG GCCCGAGGGC
GCCTCCCTGG CGCGGCGCAG CGATCGCTTC TTCGCCGCCT TCATGCTGCG CTACCGCGCC
AGCCTGGGCT GGGCGCTGGA GCACTCGCGG CTGATGGTGG TGATCATGCT GGCCTGCATC
GCCATGAACC TCTGGTTGTT CGTGGTGGTG CCCAAGGGCT TCCTCCCGCA GCAGGACTCC
GGGCGCCTGC GCGGCTACGC GGTGGCCGAC CAGAGCATCT CGTTCCAGTC CCTGAGCGCG
AAGATGGGCG AGTACCGCAA GATCCTCTCT TCCGATCCGG CGGTGGAAAA CGTGGTCGGC
TTCATCGGCG GCGGCCGCTG GCAGTCGAGC AACACCGGTT CGTTCTTCGT CACCCTCAAG
CCGATCGGCG AACGCGACCC GGTGGAGAAG GTCCTCACCC GGCTGCGCGA GCGGATCGCC
AAGGTGCCCG GCGCGGCGCT CTATCTCAAT GCCGGCCAGG ACGTGCGCCT GGGCGGCCGC
GACAGCAACG CGCAGTACGA ATTCACCCTG CGCAGCGACG ACCTGACCCT GCTCCGCGAA
TGGGCGCCGA AGGTCGAGGC GGCGATGCGC AAGCTGCCGC AGCTGGTGGA CGTCAACAGC
GACTCCCAGG ACAAGGGCGT GCAGACCCGC CTGGTGATCG ACCGCGACCG TGCGGCGACC
CTGGGGATCA ACGTGGAAAT GGTCGACGCG GTGCTCAACG ATTCCTTCGG CCAGCGCCAG
GTGTCGACCA TCTTCAACCC GCTGAACCAG TACCGGGTGG TGATGGAGGT CGACCAGCAG
TACCAGCAGA GCCCGGAGAT CCTCCGCCAG GTCCAGGTGA TCGGCAACGA CGGCCAGCGC
GTGCCGCTGT CCGCGTTCAG CCACTACGAA CCGAGCCGGG CACCGCTGGA AGTCAACCAC
CAGGGCCAGT TCGCCGCCAC CACGCTGTCC TTCAACCTGG CGCCGGGCGC GCAGATCGGC
CCGACCCGCG AGGCCATCAT GCAGGCCCTG GAGCCGCTGC ACATCCCGGT GGACGTGCAG
ACCAGCTTCG AGGGCAACGC CGGCGCGGTG CAGGACACGC AGAACCAGAT GCCCTGGCTG
ATCCTCCTGG CGCTGCTGGC GGTGTACATC GTCCTCGGCA TCCTCTACGA GAGCTACGTG
CACCCGCTGA CCATCCTCTC GACCCTGCCT TCGGCCGGGG TCGGCGCGCT GCTCGCGCTG
ATCCTCTGCC GCAGCGAGCT GAGCCTGATC GCGCTGATCG GCATCATCCT GCTGATCGGC
ATCGTCAAGA AGAACGCGAT CATGATGATC GACTTCGCCC TGGAGGCCGA GCGCAACCAC
GGCCTGAGCC CGCGCGAGGC GATCCTCGAG GCCTGCATGA TGCGCTTCCG GCCGATCATG
ATGACCACCC TGGCTGCCTT GCTCGGCGCC TTGCCGCTGA TCTTCGGCAT CGGCGGCGAC
GCCGCGCTGC GCCGGCCGCT GGGCATCACC ATCGTCGGCG GGCTGATCGG CAGCCAGTTG
CTGACCCTGT ACACCACCCC GGTGGTCTAC CTCTATCTCG ACCGCCTGCG CCACTGGGTC
AACCAGAAAC GCGGCGTACG CACGGACGGT GCGCTGGAGA CACCCCTATG A
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| Protein sequence | MSLSTPFIRR PVATTLLTLA LLLAGTLSFG LLPVAPLPNV DFPAIVVSAS LPGASPETMA
SSVATPLERS LGRIAGISEM TSSSSLGSTT VVLVFDLEKD IDGAAREVQA AINGAMSLLP
SGMPNNPSYR KANPSDMPIM VLTLTSETQS RGEMYDLAST VLAPKLSQVQ GVGQVSIGGS
SLPAVRVDLN PDAMSQYGLS LDSVRTAIAA ANSNGPKGAV EKDDKHWQVD ANDQLRKARE
YEPLVIHYNA DNGAAVRLGD VAKVSDSVED VRNAGFSDDL PAVLLIVTRQ PGANIIEATD
AIHAQLPVLQ ELLGPQVKLN VMDDRSPSIR ASLEEAELTL LISVALVILV VFLFLRNGRA
TLIPSLAVPV SLIGTFAVMY LCDFSLNNLS LMALIIATGF VVDDAIVVVE NIARRIEEGD
PPIQAAITGA RQVGFTVLSM TLSLVAVFIP LLLMGGLTGR LFREFAVTLS AAILVSLVVS
LTLTPMLCAR LLRPLKRPEG ASLARRSDRF FAAFMLRYRA SLGWALEHSR LMVVIMLACI
AMNLWLFVVV PKGFLPQQDS GRLRGYAVAD QSISFQSLSA KMGEYRKILS SDPAVENVVG
FIGGGRWQSS NTGSFFVTLK PIGERDPVEK VLTRLRERIA KVPGAALYLN AGQDVRLGGR
DSNAQYEFTL RSDDLTLLRE WAPKVEAAMR KLPQLVDVNS DSQDKGVQTR LVIDRDRAAT
LGINVEMVDA VLNDSFGQRQ VSTIFNPLNQ YRVVMEVDQQ YQQSPEILRQ VQVIGNDGQR
VPLSAFSHYE PSRAPLEVNH QGQFAATTLS FNLAPGAQIG PTREAIMQAL EPLHIPVDVQ
TSFEGNAGAV QDTQNQMPWL ILLALLAVYI VLGILYESYV HPLTILSTLP SAGVGALLAL
ILCRSELSLI ALIGIILLIG IVKKNAIMMI DFALEAERNH GLSPREAILE ACMMRFRPIM
MTTLAALLGA LPLIFGIGGD AALRRPLGIT IVGGLIGSQL LTLYTTPVVY LYLDRLRHWV
NQKRGVRTDG ALETPL
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