Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_31480 |
Symbol | |
ID | 4381460 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 2737104 |
End bp | 2738189 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639325112 |
Product | AraC family transcriptional regulator |
Protein accession | YP_790681 |
Protein GI | 116050500 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.263324 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0000037216 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAAGAACG ACGGCGAGAC TCAGGCGAGC ACCAAGGGCA CCATCTCGGT GCGCCTGGTC GGCGAGGCGC TGGTGGAGTG GCGCCGGCAG GGCGGCGAGG AGGGGGAGGT CCTCCAGGCC GCCGGTATCG ATCCGCAGTT GCTCGGCAAA CCCTACGCGC GGGTCACCTC GCACGCCTAT TCGCGGCTCT GGCTGGATCT GGCTCGGCGC ATGGACGACG AGTTCTTCGG CATGGACGCG CGGCGCCTGA AGAGTGGCAG CTTCGCTTTC ATGAGCCGCT GCGCGATCCA CGAGCAGACC CTGGAACCGG CGCTGACCGG CATCCTGCGA TTCCTCTGCC TGCAGTTCGA CGACTTCCAG CCGCGCCTGC AGCGCCGCGG CGGCCTGGCG GAAATCGTCC TCGACGAGGC GCCGGGCCGG TACGGGCGAG CGCTGTCCTA CTTCACCCTG TGGATGATCA CCCATGGCCT GGCCTGCTGG CTGGTCGGCC GGCGCATCCC GATCCTGGCC ATCGACCTGC GCTGTCCGCA GCCGGACTAC ATCGAGGACT ACCGGGTGAT GTTCAGCGAC AACCTGCGTT TCTCCCGTCC CCTCAGCCGC CTGCTGTTCA ATGCCGACTG CCTGGCTCTG CCGGTCCGCC GCGACAAGCG GGAGCTGCGG CGCTTCCTGC TCGGCGCGCC GGCCAACATC CTGGTCCGCT ATCGCGATCC GCAGAGCCTG GCGGCGCGGA TCAAGGCCTA CCTGCGCAGC CTGCGGCCGG GACGCTGGCC GGACGCGGAC GCGCTCGCCG GGCATTTCTT CATGGCGCCC TCGACCCTGC GCCGCAAGCT GTCCCTGGAA GGGCAGAGCT ACCAGGCGCT GAAGGACCAG GTCCGCCGCG ACCTGGCCAT CGCGCGGCTG GACGCCGGCG CGGCGAATTT CGCCGAACTG GCGCTGGAGC TGGGCTTCGC CGATGGCAGC GCGTTCCACA AGGCGTTCAA GAAGTGGACC GGCTTGACCC CCGGGCAGTA CCGGGCGCAG GTCGCGGCGG AAACCGCGTC GGCCGAGTCG TCAGGCGTCT TGTCCGAAAC GCTCGGCCGT CGATAG
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Protein sequence | MKNDGETQAS TKGTISVRLV GEALVEWRRQ GGEEGEVLQA AGIDPQLLGK PYARVTSHAY SRLWLDLARR MDDEFFGMDA RRLKSGSFAF MSRCAIHEQT LEPALTGILR FLCLQFDDFQ PRLQRRGGLA EIVLDEAPGR YGRALSYFTL WMITHGLACW LVGRRIPILA IDLRCPQPDY IEDYRVMFSD NLRFSRPLSR LLFNADCLAL PVRRDKRELR RFLLGAPANI LVRYRDPQSL AARIKAYLRS LRPGRWPDAD ALAGHFFMAP STLRRKLSLE GQSYQALKDQ VRRDLAIARL DAGAANFAEL ALELGFADGS AFHKAFKKWT GLTPGQYRAQ VAAETASAES SGVLSETLGR R
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