Gene PA14_30690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_30690 
Symbol 
ID4380614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2659452 
End bp2660507 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content53% 
IMG OID639325041 
Producthypothetical protein 
Protein accessionYP_790611 
Protein GI116050570 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.000866279 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.000842933 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAAAAAGC CAGCTCCCGC ACACATCAAG CTACTCTTCT GCATTGGTAT ATCGACCGCT 
GGATGCCTTT GGTCGCTCTC CTCGGTGGCC TATTGCGGCA AGCCTGAACT ACCTACCAAG
ACCCCCCTGC CGATACAGAG CCTCCAATCC GTTTTCACCT TGAAGCACGC ACCGATCGGT
AAATCGATGG GAACAATGAC CGTGCAAGTC GGCTCAGGAG AAACTCTAGG TGGCTGGGCG
TGGTGCGGAA GTGACGGAAA GCCCGGACAA TTCGGTTTTA CAGCTCCCAA AACTACCCTC
ATTCCAATAG ATGGAAATGG CCTCTATGAG TCTGGAGTGC CAGGGGTCGG TATCAGAATT
GGACACCGAG CACGCTATAA CTGGACCGAA CCGACAGCAG CTCCCGCCAC CTACCCCACG
GGCAACATCG GCACCATGCG CTATATGCCC ACTGTTCTCG TAGTTGATTT CATCCGAACC
GCAATGGGAG TAGGAAAGGG AGACATCACC CCTTTTAACT ACTCAACCAA TTTTTTCATC
GATACCAACT ACACAAATCC ATCCAGGGCT GAATTCACCA TAGAGGGATA TAACCTTCGC
GCAACGCTTG AACATAACGC TTTCTTCACC ACGTGCAGCA CACAAAAGTC GACCATTGAT
GTCAACATGG GGCGCCCAAC GGCGTATGAC ATCAAAAGAG GGGCTGTGCC AGATCATGGC
TTTTCACTGG ATGTTGTGTG CGAAGGACTC AATCCGAGTG TCAAACCTCC TGTGAAGGTC
TACTTTGAAG GAAACTCGAT CCAGGATGGC CTGTTGAACC TCACAGGCAG AGGAGAAGCC
GGTGTAGCCC AAGGAGTCGG CATTTCGTTG ATGTCCAGTA AAGGAGCGGC ATTGCCATTC
ACCCAAGCCA AGGCCCTGCC CCTGGACTGG CTGGCCAGCG GTGCTGGGAC GGAGATGTAC
CGCTTTGTGG GATCGGCTCG CTATGTCGCC ACTGGCGGAA AAATCACCGC GGGTAAAGCT
GACTCCATTT TGACCTACAT CCTGGAGTAC AACTAA
 
Protein sequence
MKKPAPAHIK LLFCIGISTA GCLWSLSSVA YCGKPELPTK TPLPIQSLQS VFTLKHAPIG 
KSMGTMTVQV GSGETLGGWA WCGSDGKPGQ FGFTAPKTTL IPIDGNGLYE SGVPGVGIRI
GHRARYNWTE PTAAPATYPT GNIGTMRYMP TVLVVDFIRT AMGVGKGDIT PFNYSTNFFI
DTNYTNPSRA EFTIEGYNLR ATLEHNAFFT TCSTQKSTID VNMGRPTAYD IKRGAVPDHG
FSLDVVCEGL NPSVKPPVKV YFEGNSIQDG LLNLTGRGEA GVAQGVGISL MSSKGAALPF
TQAKALPLDW LASGAGTEMY RFVGSARYVA TGGKITAGKA DSILTYILEY N