Gene PA14_30500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_30500 
Symbol 
ID4385920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2641114 
End bp2642265 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content70% 
IMG OID639325026 
Productputative acyl-CoA dehydrogenase 
Protein accessionYP_790597 
Protein GI116050584 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGTCC TGCAGACTCC CTCGGCGGCG TTCGACGAAT GGCTGCCGGA ACTGACCCGG 
CAACTGGCGG AAAGCGCCGA TGCCCATGAC CGCAGCGGAG ATTTTCCCCA TGCCAACCTG
GCCCTGCTGC GACACCACGG GCTGCTCGCC CTAGCCTTGC CGCCTGCGCT CGGCGGTCCC
GGCGCCAGCC TCGGCGAGCT GCGCAGGGTA ATCGGCGCGG TGGCTCGCGG CGAACCCTCC
ACGGCCCTGG TGCTGTGCAT GCAGTACCTG CATTTGCGGC GCCTGGCCGA TAACCCCGAT
TGGCCCGGCG CGCTCAAGCG GCGCGTGGCG CGCGAGGTGC TGGAGCAGGG GGCGTTGATC
AATAGCCTGC GCGTGGAGCC CGAGCTGGGT TCGCCGTCAC GCGGCGGTCT GCCGGGTACG
CTGGCGCGGC GTGTCGGCGA CGGCTGGCGG CTGTCCGGGC ACAAGCTCTA CACCACCGGC
ATTCCCGGGC TGACCTGGCT GGCGGTATGG GCGTGCAGCG ACGAGCCGAT CCCACGCGTG
GGTACCTGGC TGGTGCGCCG CGACAGCCCA GGCATCCGTA TCGTGGAGAG CTGGGACCAT
CTGGGCATGC GCGCCAGCGG CAGCCACGAG GTGCTCTTCG AAGAGGTGGC GGTGCCTCTG
GAAAACGCCA TCGGCCTGCA TCCCCACGAC CAGCCTCCGG CGCCGGACCA GGCCGTGCTG
CGCGACTTCG CCCAGGCTAG CGCGGTGTTG CTTGGCGCTC TCTACGACGG TATCGCCGGG
AGCGCCCGCG AGTGGCTCGT CGGCTGGCTG CGCGAGCGCG TGCCGGCCAG TCTCGGCGCG
CCGTTGGCGA GCCTGCCGAG GATGCAGGAG GCGCTCGGCG AGATCGACGG CCTGCTCCTG
CAGAACCGCC TGCTGCTCGA TGCCGCGTGC TGCGGACAGT TGCCCGCCAG CGACTCCGGG
CTGCTCAAGG TCGCGGTCAT CGACAACGCG TTGGCAGTGG TCGAGAAGGC CCTGGAACTG
AGCGGCAACC ACGGCCTCAG CCGGCACAAT CCGCTACAGC GGCACTACCG CGACGTGCTT
TGCGGACGTG TCCACACGCC ACAGAAAGAT AGCGTCTGGA GCGCGGCGGG GAGGGCGGCA
CTGAGTCTTT GA
 
Protein sequence
MAVLQTPSAA FDEWLPELTR QLAESADAHD RSGDFPHANL ALLRHHGLLA LALPPALGGP 
GASLGELRRV IGAVARGEPS TALVLCMQYL HLRRLADNPD WPGALKRRVA REVLEQGALI
NSLRVEPELG SPSRGGLPGT LARRVGDGWR LSGHKLYTTG IPGLTWLAVW ACSDEPIPRV
GTWLVRRDSP GIRIVESWDH LGMRASGSHE VLFEEVAVPL ENAIGLHPHD QPPAPDQAVL
RDFAQASAVL LGALYDGIAG SAREWLVGWL RERVPASLGA PLASLPRMQE ALGEIDGLLL
QNRLLLDAAC CGQLPASDSG LLKVAVIDNA LAVVEKALEL SGNHGLSRHN PLQRHYRDVL
CGRVHTPQKD SVWSAAGRAA LSL