| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_29990 |
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| Symbol | nuoD |
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| ID | 4380670 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 2596164 |
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| End bp | 2597945 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639324983 |
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| Product | bifunctional NADH:ubiquinone oxidoreductase subunit C/D |
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| Protein accession | YP_790555 |
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| Protein GI | 116050626 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7
[COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit |
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| TIGRFAM ID | [TIGR01961] NADH (or F420H2) dehydrogenase, subunit C
[TIGR01962] NADH dehydrogenase I, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCAG ACTCCGCTCT GTACATCCCG CCTTACAAGG CAGACGACCA GGATATCGTC
GTCGAACTGA ATTCCCGCTT TGGCGCCGAG ACCTTCACCG TCCAGCCCAC CCGTACCGGC
ATGCCGGTGC TCTGGGTCCC GCGCGAAAGA CTGATCGAAG TCCTGACCTT CCTCCGTCAG
GTACCCAAGC CCTACGTGAT GCTCTACGAC CTGCACGGCG TCGACGAGCG GCTGCGCACC
CATCGCCGCG GCCTGCCGAG CGCCGACTTC AGCGTGTTCT ACCACCTGAT GTCGCTGGAG
CGTAATAGTG ACGTGATGAT CAAGGTCGCC TTGTCCGAGC GCGACCTCAA CCTGCCCACC
GCCACCCGTA TCTGGCCCAA CGCCAACTGG TACGAGCGCG AAGTGTGGGA CATGTACGGC
ATCACCTTCA CCGGCCACCC GCACCTGACC CGCATGCTGA TGCCGCCGAC CTGGCAGGGC
CATCCGCTGC GCAAGGACTA CCCGGCGCGC GCCACCGAGT TCGATCCCTA CTCCCTGTCC
GCCGCCAAGC AGGACCTGGA GCAGGAGGCC CTGCGCTTCA AGCCGGAAGA CTGGGGCATG
AAGCGCCACG GCGAGAACGA GGACTACATG TTCCTCAACC TCGGCCCGAA CCACCCGTCC
GCCCACGGCG CGTTCCGCAT CATCCTGCAA CTGGACGGCG AGGAGATCAT CGACTGCGTC
CCGGAGATCG GCTACCACCA CCGCGGCGCC GAGAAGATGG CCGAGCGCCA GTCCTGGCAC
AGTTTCATCC CCTACACCGA CCGCATCGAC TACCTCGGCG GGGTGATGAA CAACCTGCCC
TACGTACTCT CGGTGGAGAA GCTCGCCGGG ATCAAGGTGC CGCAGCGGGT CGACGTGATC
CGGATCATGA TGGCGGAGTT CTTCCGTATC CTGAACCACC TGCTGTACCT GGGCACCTAT
ATCCAGGACG TCGGCGCCAT GACCCCGGTG TTCTTCACCT TCACCGACCG CCAGCGCGCC
TACAAGGTGG TCGAGGCCAT CACCGGCTTC CGCCTGCACC CGGCCTGGTA CCGCATCGGC
GGCGTCGCCC ACGACCTGCC GCGCGGCTGG GACAAGCTGG TCCGCGAGTT CCTCGACTGG
ATGCCCAAGC GCCTCGACGA GTACGAGACC GCGGCCCTGA AGAACAGCAT CCTGCGCGGC
CGGACCATCG GCGTCGCCCA GTACAACACC AAGGAAGCCC TCGAGTGGGG CACCACCGGC
GCCGGCCTGC GCGCCACCGG TTGCGACTTC GACCTGCGCA AGGCCCGCCC CTACTCCGGC
TACGAGAACT TCGAGTTCGA GGTACCGCTG GCCCACAACG GCGACGCCTA CGACCGCTGC
ATGGTCAAGA TGGGCGAGAT GCGCCAGAGC CTGCGGATCA TCGAACAGTG CCTGAAGAAC
ATGCCGGAAG GCCCGTACAA GGCCGACCAT CCGCTGACCA CGCCGCCGCC GAAAGAACGC
ACGCTGCAAC ACATCGAAAC CCTGATCACC CACTTCCTGC AGGTTTCCTG GGGCCCGGTC
ATGCCGGCCA ACGAAGCCTT CCAGATGATC GAGGCGACCA AGGGTATCAA CAGCTACTAC
CTGACCAGCG ACGGCAGCAC CATGAGCTAC CGCACGCGTA TCCGGACGCC CAGCTTCGCG
CACCTGCAAC AGATCCCCTC GGTGATCAAC GGCAGCATGA TCGCGGACCT GATCGCCTAC
CTGGGTAGCA TCGATTTCGT TATGGCTGAC GTGGACCGCT GA
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| Protein sequence | MTADSALYIP PYKADDQDIV VELNSRFGAE TFTVQPTRTG MPVLWVPRER LIEVLTFLRQ
VPKPYVMLYD LHGVDERLRT HRRGLPSADF SVFYHLMSLE RNSDVMIKVA LSERDLNLPT
ATRIWPNANW YEREVWDMYG ITFTGHPHLT RMLMPPTWQG HPLRKDYPAR ATEFDPYSLS
AAKQDLEQEA LRFKPEDWGM KRHGENEDYM FLNLGPNHPS AHGAFRIILQ LDGEEIIDCV
PEIGYHHRGA EKMAERQSWH SFIPYTDRID YLGGVMNNLP YVLSVEKLAG IKVPQRVDVI
RIMMAEFFRI LNHLLYLGTY IQDVGAMTPV FFTFTDRQRA YKVVEAITGF RLHPAWYRIG
GVAHDLPRGW DKLVREFLDW MPKRLDEYET AALKNSILRG RTIGVAQYNT KEALEWGTTG
AGLRATGCDF DLRKARPYSG YENFEFEVPL AHNGDAYDRC MVKMGEMRQS LRIIEQCLKN
MPEGPYKADH PLTTPPPKER TLQHIETLIT HFLQVSWGPV MPANEAFQMI EATKGINSYY
LTSDGSTMSY RTRIRTPSFA HLQQIPSVIN GSMIADLIAY LGSIDFVMAD VDR
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