Gene PA14_28960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_28960 
Symbol 
ID4380732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2504199 
End bp2504678 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content66% 
IMG OID639324900 
Producthypothetical protein 
Protein accessionYP_790472 
Protein GI116050708 
COG category[S] Function unknown 
COG ID[COG3865] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.295823 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0000347275 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCAGCA AGAACACCAT CTGCCTCTGG TACGACAGTG CCGCCCTGGA GGCCGCGACC 
TTCTACGCCG AGACATTTCC TGACAGCGCC GTGCTGGCTG TCCATCGTGC GCCCGGCGAC
TACCCTTCCG GCAAGGAGGG TGACGTGCTG ACGGTGGAGT TCCGGGTGAT GGGCATTCCC
TGCCTCGGCC TCAACGGCGG CCCGGCCTTC CGCCACAGCG AAGCGTTCTC CTTCCAGGTC
GCCACCGACG ACCAGGCCGA GACCGACCGC CTGTGGAACG CCATCGTCGA CAATGGCGGC
GAGGAAAGCG CCTGCGGCTG GTGCCGCGAC AAATGGGGCA TCTCCTGGCA GATCACCCCG
CGCGTTCTCA GCGAAGCCAT CGCCAGCCCC GACCGCGCGG CGGCCAGGCG CGCCTTCGAG
GCGATGATGA CGATGGGCAG GATCGATATC GCCACCATAG AGAAGGCCTT CAAGGGCTGA
 
Protein sequence
MISKNTICLW YDSAALEAAT FYAETFPDSA VLAVHRAPGD YPSGKEGDVL TVEFRVMGIP 
CLGLNGGPAF RHSEAFSFQV ATDDQAETDR LWNAIVDNGG EESACGWCRD KWGISWQITP
RVLSEAIASP DRAAARRAFE AMMTMGRIDI ATIEKAFKG