Gene PA14_27900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_27900 
Symbol 
ID4380826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2415466 
End bp2416185 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content69% 
IMG OID639324803 
Productputative transcriptional regulator 
Protein accessionYP_790377 
Protein GI116050802 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGTCG ATCAATCTCG TCAGTACCTG CGCATCCGCG ACCAGCTCGC CGCGGATATC 
GCCCAGGGCG TGCTGCAGGT GAAACTTCCC TCCGAGCGGG AGTTGGCCGA GCGCTTCCTG
TGTACCCGCA TCACCCTTCG CGAAGCCCTG CAGCAACTGG AAACCGAAGG CCTGGTCTAT
CGCGAGAACC GCCGCGGCTG GTTCGTCGCG CCGCCGCGGA TCCGCTACAA CCCGACCCGT
ACCACCGGCT TCATGGAATA CGTCAGCGCC CAGGGACGCC AGCCGCGTAC CGAGACGCTG
CACGCCGAGC GGCGAGCAGC CGGCGCCTGG CTGGCCAAGC GGATGGGGCT GGAGGACAGC
GCGCCGGTGT ATTTCCTGCA ACGGCGCCGC TGGGTGGACG AGCGTCCGGT GCTGATCGAA
CTGATCGCCC TGGATGCCGG GTGGTGCCCA GGCCTGCTGG ACCACGACCT CGATACTTCG
CTGATGAGCC TGCTGCGCGA GCGTTTCGGC CTGCAGCCGA CGCGCTGCCA ACTGGCGATG
CACCCGACCG CGCTGAACGC GGCCCAGGCC GAGCCGCTGC AACTGGCGCC GGGTTCGCCG
GCGCTGTACC TGGAGCGACT GAGTTACGCG GAGGGGCAGA GGGTGGTCGA GTTCGACCAG
GAGTTCTGGC GCCCGGACGC CCTGGAGATC GTGCTCGACG CGGCCTATCC GGGCGCCTGA
 
Protein sequence
MPVDQSRQYL RIRDQLAADI AQGVLQVKLP SERELAERFL CTRITLREAL QQLETEGLVY 
RENRRGWFVA PPRIRYNPTR TTGFMEYVSA QGRQPRTETL HAERRAAGAW LAKRMGLEDS
APVYFLQRRR WVDERPVLIE LIALDAGWCP GLLDHDLDTS LMSLLRERFG LQPTRCQLAM
HPTALNAAQA EPLQLAPGSP ALYLERLSYA EGQRVVEFDQ EFWRPDALEI VLDAAYPGA