| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_27430 |
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| Symbol | |
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| ID | 4380883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 2380246 |
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| End bp | 2381838 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639324761 |
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| Product | putative multidrug efflux MFS transporter |
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| Protein accession | YP_790338 |
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| Protein GI | 116050839 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0744165 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.700486 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTCGC TCGCCACCCC GCTCGGCCAG CCGACGCCAA CCTCAGCCCC CGCCGCCCAG
CCTTTCGGCG CGCGCATCGT GGTCGGCCTG CTCGGCGTGC TGCTCGCCTC GCTCACCGCC
GGTCTCAATG GTCATGTCAC CGAGATCGCC ATGACCGATG TGCGCGGCGC ACTCGCCATC
GGCCATGACG AAGGCACCTG GCTGACCGTG CTCTACGAAG CCACCCAGGT CGCCGCCATG
GCATTCGCGC CCTGGTGTTC GGTGACCTTT TCCCTGCGCC GCTTCACGCT CTTCGCCATC
GGCGGCTTCG CCCTGCTGGC CCTGCTCTGT CCGTTCGCGC CGAACCTCGA GAGCCTGCTG
GTCCTGCGCA CCCTGCAAGG GTTGATGGCC GGCTGCCTGC CGCCGATGCT GATGACCGTG
GCGCTACGCT TCCTGCCGCC GGGGATAAAG CTCTACGGCC TGGGCGCCTA TGCCCTCACC
GCGACCTTCG GGCCCAACCT GGGCCTGCCG CTGGCGGCGT TCTGGTTCGA ATACGTCGGC
TGGCAGTGGG TGTTCTGGCA GGTCATTCCG CTGTGCCTGG TAGCGATGGC CGCGGTGTCC
CATGGCCTGC CCCAGGACCC GGTGCGCCTG GAACGCTTCC GCCAGTTCGA CGGCATCGGC
CTGCTCACCG GTTTCCCGGC GATCTGCGCC CTGGTGATCG GTCTGCTGCA AGGCGAACGC
CTGGACTGGT TCGAGTCGCC GCTGATCTGC CTGCTGCTGG GCAGCGGCAG CCTCCTGCTG
GGGCTGTTCC TGGTCAACGA ATGGAGCCAC CCGCTGCCGT TCTTCCGCCT GCAGTTGCTG
AAGCGGCGCA ACCTGACCTT CGCCCTGATC ACCCTGGCCG GCGTGCTGGT GGTGCTCGGC
GCGAGCATGG GCGTGCCGAC CGAATTCCTC GCCGAAATCC GCGGCTACCG CCCCCTGCAG
AGCGTACCCA TGGTGTTGCT GGTGGCTCTT CCGCAGCTCG TCGCGCTGCC GCTGGTGGCG
GCCCTCTGCA ACATCCCGCG GGTCGACTGC CGCTGGGTGC TGGCCTGCGG CCTGTGCCTG
TGCGCCGGTG CCTGCCTGAG CTTCAGCCAA CTGACGGCGG ACTGGGTGCG CGAGGACTTC
TACCTGCCGA TGCTGTTACT GGTGGTCGGC CAGCCGATGG CGGTGATTCC GCTGCTGATG
CTCTCCACCA GCGTCATCGC GCCCATCGAG GGGCCCTTCG CCTCAGCCTG GTTCAACACC
GTCCGCGGCT TCTCCGGGGT AGTCGCCACC GCGGTGATCG GCGCCCTCGG CACCGCCCGC
GAGCACTACC ACTCCAACCG CCTGGTGGAT CACCTGGGCA ATGCGTCCCA GGCCGTCGAA
CTGCGCCTGC AACAGATCGC CGGCCTGCAA CCGGGCGCCG ACTCCGGCGC GCACTGGCAG
CACCTGGCCG AACAGGCCCG CCAACAGGCC CAGGTGCTGG GCAACGCCGA CGTGCTGCTG
GCGATGACCG GCCTGGCCTG CGCCCTGCTG ATCCTGATTC CGATCCTGCC GCAACGGGCC
TACCCGCCCC GCCCGGTCGC TCCCACACAC TGA
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| Protein sequence | MTSLATPLGQ PTPTSAPAAQ PFGARIVVGL LGVLLASLTA GLNGHVTEIA MTDVRGALAI
GHDEGTWLTV LYEATQVAAM AFAPWCSVTF SLRRFTLFAI GGFALLALLC PFAPNLESLL
VLRTLQGLMA GCLPPMLMTV ALRFLPPGIK LYGLGAYALT ATFGPNLGLP LAAFWFEYVG
WQWVFWQVIP LCLVAMAAVS HGLPQDPVRL ERFRQFDGIG LLTGFPAICA LVIGLLQGER
LDWFESPLIC LLLGSGSLLL GLFLVNEWSH PLPFFRLQLL KRRNLTFALI TLAGVLVVLG
ASMGVPTEFL AEIRGYRPLQ SVPMVLLVAL PQLVALPLVA ALCNIPRVDC RWVLACGLCL
CAGACLSFSQ LTADWVREDF YLPMLLLVVG QPMAVIPLLM LSTSVIAPIE GPFASAWFNT
VRGFSGVVAT AVIGALGTAR EHYHSNRLVD HLGNASQAVE LRLQQIAGLQ PGADSGAHWQ
HLAEQARQQA QVLGNADVLL AMTGLACALL ILIPILPQRA YPPRPVAPTH
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