| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_26720 |
|---|
| Symbol | |
|---|
| ID | 4380935 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 2327152 |
|---|
| End bp | 2328768 |
|---|
| Gene Length | 1617 bp |
|---|
| Protein Length | 538 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639324708 |
|---|
| Product | putative biotin-dependent carboxylase |
|---|
| Protein accession | YP_790286 |
|---|
| Protein GI | 116050891 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG4799] Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGCGA TCCAGTCGGA ACTCGACGTC AACGGCGAGG ACTTCGCCCG TAACCGCGAG
GCCATGCTCG CCGCCGTGGC CGGCTTCCGC GAATTGGAGC AGAAGGTCCT GGACAAGGCC
GCCGAGGCCA GGCCGAAGTT CGAGAAACGC GGACAACTGC TGCCGCGCGA ACGCCTGGCG
TTGCTGCTCG ATCCGGGCGC GCCGTTCCTC GAACTGTCCT CGCTGGCCGG CTACAAGCTG
CACGACGACA AGGACGGCAC CCAGGCCGGC GGCGGGATCA TCGCCGGGAT CGGCTACATC
GCCGGGGTGC GCTGCCTGGT CAGTGCCAGC AACAGCGCGA TCAAGGGCGG CACCATCTCC
CCGACCGGGC TGAAGAAGAC CCTGCGCCTG CAGCAGATCG CCATGGAGAA CAAGCTGCCG
GTGGTGACCC TCACCGAAAG CGGCGGCGCC AACCTCAACT ATGCGGCGGA GATCTTCGTC
GAAGGTGCGC GCGGCTTCGC CAACCAGGCG CGGATCTCCG CCATGGGCAT TCCCCAGGTC
ACCGTGGTGC ATGGTTCCAG CACCGCCGGC GGTGCCTACC AGCCGGGGCT GTCGGACTAC
GTGGTGGTGG TGCGCGGCAA GGCCAAGATG TTCCTCGCCG GGCCGCCGTT GCTCAAGGCC
GCCACCGGCG AGATCGCCAG CGACGAGGAA CTCGGCGGAG CCGAACTGCA CGCGCAGGTC
GCCGGCACCG CGGAATACCT GGCGGAAAAC GACGCCGACG GCGTGCGCCT GGCCCGCGAG
ATCGTCGGCA TGTTGCCGTG GAACGCACAA CTGCCGGCGC GCCCGGCGCG TTCCTGGCGC
GAACCGCTGT ACCCGGTGGA GGAGCTGCTC GGGGTGGTTC CGGCCGACCC GAAGAAGCCC
TACGACGTCC GCGAGATCGT CGCGCGCATC GCCGACGGCT CCGAGTTCCT CGACTTCAAG
AACGAGTTCG ACGGCCAGAC CATCTGCGGC CACCTGCGCA TCGAGGGCCA CGCCTGCGGC
CTGATCGGCA ACAACGGACC GATCACCCCG CAGGGCGCGG CCAAGGCGGC GCAGTTCATC
CAACTCTGCG AACAGAGCAA CACGCCGCTG CTGTTCCTGC ACAACACCAC CGGCTTCATG
GTCGGCACCG AGTCGGAGCG CCAGGGCGTG ATCAAGCACG GCTCGAAGAT GATCCAGGCG
GTGGCCAACG CCCGCGTGCC CAAGCTGACC CTGGTGGTCG GCGGCTCCTA CGGCGCCGGC
AACTACGCGA TGTGCGGACG CGGCCTCGAC CCGCGCTTCA TCTTCGCCTG GCCGAACAGT
CGCACCGCGG TGATGGGCGG CGCCCAGGCC GGCAAGGTGC TGCGCATCGT CACCGAGGAG
AAACACGCCA AGGAAGGCAA GGAAGCCGAC CCGAAGATGC TCGACATGCT GGAAACCGTC
ACCGCGCAGA AGCTCGACAG CCAGTCCACC GCGCTTTACG GCACCGCCAG CCTGTGGGAC
GACGGCCTGG TCGACCCGCG CGACAGCCGC AGGCTGCTCG GCTACCTGCT GGATATCTGC
GCGGAAGCCG AGGCGCGGCC GCTGAAGGGC AACAGCTTCG GGGTCGCGAG GTTCTGA
|
|---|
| Protein sequence | MPAIQSELDV NGEDFARNRE AMLAAVAGFR ELEQKVLDKA AEARPKFEKR GQLLPRERLA
LLLDPGAPFL ELSSLAGYKL HDDKDGTQAG GGIIAGIGYI AGVRCLVSAS NSAIKGGTIS
PTGLKKTLRL QQIAMENKLP VVTLTESGGA NLNYAAEIFV EGARGFANQA RISAMGIPQV
TVVHGSSTAG GAYQPGLSDY VVVVRGKAKM FLAGPPLLKA ATGEIASDEE LGGAELHAQV
AGTAEYLAEN DADGVRLARE IVGMLPWNAQ LPARPARSWR EPLYPVEELL GVVPADPKKP
YDVREIVARI ADGSEFLDFK NEFDGQTICG HLRIEGHACG LIGNNGPITP QGAAKAAQFI
QLCEQSNTPL LFLHNTTGFM VGTESERQGV IKHGSKMIQA VANARVPKLT LVVGGSYGAG
NYAMCGRGLD PRFIFAWPNS RTAVMGGAQA GKVLRIVTEE KHAKEGKEAD PKMLDMLETV
TAQKLDSQST ALYGTASLWD DGLVDPRDSR RLLGYLLDIC AEAEARPLKG NSFGVARF
|
|---|
| |