Gene PA14_25250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_25250 
Symbol 
ID4381027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2208690 
End bp2210075 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content63% 
IMG OID639324593 
Productglyceraldehyde-3-phosphate dehydrogenase 
Protein accessionYP_790171 
Protein GI116051003 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCCGC TGATTGGCCA GCTCTACCGC AATAACAATG TGGTGACCTC GATCCATGGC 
CGTGGTCTGA TCAACCGCTC GGTGATCGCG ATCATGAAGG CGCATCGTTT CGCCCGTCAT
CGCATGGCTG ATGACGCCGA GCTGTCGGTT CACGAGACGT TCCCGATCCT CAAGGCGATG
AGCGAGCTCA AGCTGGGCGC CGCTTCCGTC GATCTGGGCA AGATGGTCGC CAAGTTCAAG
GCAGAAGGTA ACGGCCGCAG CATCGAGGAC TTCGTCAAGG CCGAGCTGGC CGAAGTGGCC
GGCAAGCAGA ACGGCGATGC CCGCGAAGGC ACCGACGTCG TGCTCTACGG CTTCGGCCGC
ATCGGTCGCC TGCTGGCGCG TATCCTGATC GAGAAGACCG GCGGCGGCGA CGGCCTGCGC
CTGCGCGCGA TCGTCGTGCG CAAGGGCGCC GAGAACGACC TGGTCAAGCG GGCCAGCCTG
CTGCGTCGGG ACTCGGTGCA TGGTCCGTTC GACGGCACCA TCACCATCGA CGAAGAAAAC
AACACGCTGA CCGCCAACGG CAACCTGATC CAGGTGATCT ACTCCAACGA CCCGGCGTCG
ATCGACTACA CCCAGTACGG CATCAAGAAC GCCCTGCTGG TCGACAACAC CGGCAAGTGG
CGCGACGCCG AAGGCCTCGG CCAGCACCTG AAGTGCCCGG GGATCGATCG CGTGGTCCTT
ACCGCTCCGG GCAAGGGTGC GCTGAAGAAC ATCGTGCACG GTATCAACCA CACCGACATC
GGCGCCGACG ACAAGATCAT CTCGGCCGCC TCCTGCACCA CCAACGCCAT CGTGCCGGTG
CTGAAGGCCG TCAACGACCA GTACGGCATC GTCAACGGTC ACGTCGAGAC CGTCCACTCG
TACACCAACG ACCAGAACCT GATCGACAAC TTCCACAAGG GCAGTCGTCG TGGCCGCAGC
GCGCCGCTGA ACATGGTGAT CACCAAGACC GGTGCCGCCA CCGCCGCGGC CAAGGCCCTG
CCGGTGCTGA AAGGCAAGCT GACCGGCAAT GCGATCCGCG TGCCGACGCC GAACGTGTCC
ATGGCGATCC TCAACCTGAA CCTGGAAAAG GCCACCACCC GCGAAGAGAT CAACGAGTAC
CTGCGCCAGA TGGCCATGCA CTCGGACCTG CAGAAGCAGA TCGACTTCGT CAGCTCCCAG
GAAGTGGTTT CCACCGACTT CGTCGGTTCG CGCCATGCCG GCGTGGTGGA CGCCGAGGCG
ACCATCTGCA ACGACAACCG TGTCGTCCTG TACGTGTGGT ACGACAACGA GTTCGGCTAC
AGCTGCCAGG TAGTGCGCGT GATGGAAGAC ATGGCTGGGG TCAACCCGCC GGCCTTCCCG
CGTTGA
 
Protein sequence
MIPLIGQLYR NNNVVTSIHG RGLINRSVIA IMKAHRFARH RMADDAELSV HETFPILKAM 
SELKLGAASV DLGKMVAKFK AEGNGRSIED FVKAELAEVA GKQNGDAREG TDVVLYGFGR
IGRLLARILI EKTGGGDGLR LRAIVVRKGA ENDLVKRASL LRRDSVHGPF DGTITIDEEN
NTLTANGNLI QVIYSNDPAS IDYTQYGIKN ALLVDNTGKW RDAEGLGQHL KCPGIDRVVL
TAPGKGALKN IVHGINHTDI GADDKIISAA SCTTNAIVPV LKAVNDQYGI VNGHVETVHS
YTNDQNLIDN FHKGSRRGRS APLNMVITKT GAATAAAKAL PVLKGKLTGN AIRVPTPNVS
MAILNLNLEK ATTREEINEY LRQMAMHSDL QKQIDFVSSQ EVVSTDFVGS RHAGVVDAEA
TICNDNRVVL YVWYDNEFGY SCQVVRVMED MAGVNPPAFP R