| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_24330 |
|---|
| Symbol | |
|---|
| ID | 4384111 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 2113036 |
|---|
| End bp | 2115417 |
|---|
| Gene Length | 2382 bp |
|---|
| Protein Length | 793 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639324515 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_790094 |
|---|
| Protein GI | 116051076 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1033] Predicted exporters of the RND superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.507248 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 64 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGCCA TGAACCAGCA TCAGCAAAAC AAGGCGAGCC TGCTCGAACG CCTGATCTTC
AACAACCGGC CGGTGGTGAT CTTCCTCTGC CTGCTGGTCA GCGTCTTCCT GTTCTACCAG
GCCACCCAGG TGCGGCCGTC CACCAGCTTC GAGAAGATGA TCCCGCTGGA GCACCCGTTC
ATCCAGAAAA TGCTCGAGCA CCGCAACGAC CTGGCCAACC TCGGCAACAC CGTGCGCATC
TCGGTGGAGG CGGTGAACGG CGACATCTTC ACCAAGGAGT ACATGGAGAC GCTCCGGCAG
ATCCATGACG AGGTGTTCTA CATCCCCGGC GTCGACCGTT CCGGCCTGAA GTCGTTGTGG
AGCCCCAGCG TGCGCTGGAC CGAAGTGACC GAGGAAGGCT TCGCCGGCGG CGAGGTGATC
CCGCAGACCT ACGACGGTTC GCCGCGGGCG CTGGAGGAAC TGCGCAACAA CGTGCTCAAG
TCCGGGCAGA TCGGCCGCCT GGTGGCGAAC AACTTCAAGT CGAGCATCGT CGACGTACCG
CTGCTGGAGA TGTACCCGAA CCCGAAGAAC CAGAGCGAAC TGATCAAGCT CGACTACCGC
CAGTTCTCCC ATGAGCTGGA AGAGAAGATC CGCGACAAGT ACCAGTTGCA GAATCCCAAC
GTGAAGGTGC ACATCGTCGG CTTCGCGAAG AAGGTCGGCG ACCTGATCGA CGGGCTGGTG
ATGGTGGTCG GCTTCTTCGG TATCTGCCTG CTGATCACCC TGGTCCTGCT GTACTGGTTC
ACCAAGTGCA TCCGCAGCAC CATCGCCGTG CTGATCACTA CCCTGGTGGC GGTGCTCTGG
CAGCTCGGCC TGCTCAACCT GGTCGGTTTC GGCCTCGATC CCTATTCGAT GCTGGTGCCG
TTCCTGATCT TCGCCATCGG CATCTCCCAC GGCGTGCAGA AGATCAATGG CATCGCCTTG
CAGTCCAGCG GCGCCGACAA TGCGCTGATG GCGGCGCGGC TGACCTTCCG CCAACTGTTC
CTGCCCGGGA TGATCGCGAT CCTCGCCGAC GCCGTCGGCT TCATCACCCT GCTGGTGATC
GACATCGGGG TGATCCGCGA GCTGGCCATC GGCGCCTCGA TCGGCGTGGC GGTGATCGTC
TTCACCAACC TGATCCTGCT GCCCGTGGCG ATCTCCTACA TCGGCATCAG CAAGAAGGCA
GTGCAGCGCA GCAAGGACGA CGCGGTGCGC GAGCACCCGT TCTGGCGCCT GCTGTCGAAC
TTCGCCAGCC CGAAGGTGGC CCCGGTGTCC ATCGCCATCG CCTTGCTGAT GCTCGGCGGC
GGCCTCTGGT ATGGCAAGCA CCTGAAGATC GGCGACCTCG ACCAGGGCGC GCCGGAACTG
CGTCCCGACT CGCGCTACAA CCTCGACAAC GACTTCATCA TCCGCAACTA CTCGACCAGT
TCGGACGTGC TGGTGGTGAT GGTCAAGACC ACCCCGGAAG GCTGCTCCAC CCACCAGGCC
CTGGCGGCCA TGGACGAGCT GGCCTGGAAG CTGGAGAACA CCGAGGGCGT GCAGTCGGCG
ATCTCGATGG TCACCGTGTC CAAGCAGGTG ATCAAGGGGA TGAACGAAGG CAACCTGAAA
TGGGAGACCC TGTCGCGCAA CCAGGACGTG CTGAACAACT CCATCGCCCG TGCCGACGGT
CTCTACAACA CCGACTGCTC GCTGGCGCCG CTGCTGGTCT TCCTCAACGA CCACAAGGCC
GAGACCCTCG ACCGCGCGGT GGCGGCGGTG CAGGCCTTCG CCGCGGAGAA TGACAAGGAC
GACCTGCAGT TCCAGCTGGC CGCCGGCAAC GCCGGGATCG AGGCCGCCAC CAACGAGGTG
ATCAAGCAGT CCGAACTGAT CATCCTGGTG CTGGTGTACA TCTGCGTGGC GGCCATGTGC
ATGATCACCT TCCGTTCCTT CGCCGCGACC CTCTGCATCG TCCTGCCGCT GATCCTCACC
TCGGTGCTGG GCAACGCGCT GATGGCGGCG CTGGGCATCG GCGTGAAGGT CGCGACCCTG
CCGGTGATCG CCCTCGGCGT CGGCATCGGG GTGGACTACG GGATCTACAT CTACACCCGC
CTGGAGTCTT TCCTGCGCAT GGGCCTGCCG TTGCAGGAGG CCTACTACGA GACCCTCCGC
TCCACCGGCA AGGCGGTGCT GTTCACCGGC CTGTGCCTGG CGATCGGCGT GGCCACCTGG
ATCTTCTCGG CGATCAAGTT CCAGGCCGAC ATGGGCCTGA TGCTGACCTT CATGCTGCTC
TGGAACATGT TCGGCGCCCT CTGGCTGCTG CCGGCCCTGG CGCGTTTCCT GATCAACCCG
GCCAAGCTGC AGGCCAGGAA GGCCTCGCTG TTCGCTCACT GA
|
|---|
| Protein sequence | MSAMNQHQQN KASLLERLIF NNRPVVIFLC LLVSVFLFYQ ATQVRPSTSF EKMIPLEHPF
IQKMLEHRND LANLGNTVRI SVEAVNGDIF TKEYMETLRQ IHDEVFYIPG VDRSGLKSLW
SPSVRWTEVT EEGFAGGEVI PQTYDGSPRA LEELRNNVLK SGQIGRLVAN NFKSSIVDVP
LLEMYPNPKN QSELIKLDYR QFSHELEEKI RDKYQLQNPN VKVHIVGFAK KVGDLIDGLV
MVVGFFGICL LITLVLLYWF TKCIRSTIAV LITTLVAVLW QLGLLNLVGF GLDPYSMLVP
FLIFAIGISH GVQKINGIAL QSSGADNALM AARLTFRQLF LPGMIAILAD AVGFITLLVI
DIGVIRELAI GASIGVAVIV FTNLILLPVA ISYIGISKKA VQRSKDDAVR EHPFWRLLSN
FASPKVAPVS IAIALLMLGG GLWYGKHLKI GDLDQGAPEL RPDSRYNLDN DFIIRNYSTS
SDVLVVMVKT TPEGCSTHQA LAAMDELAWK LENTEGVQSA ISMVTVSKQV IKGMNEGNLK
WETLSRNQDV LNNSIARADG LYNTDCSLAP LLVFLNDHKA ETLDRAVAAV QAFAAENDKD
DLQFQLAAGN AGIEAATNEV IKQSELIILV LVYICVAAMC MITFRSFAAT LCIVLPLILT
SVLGNALMAA LGIGVKVATL PVIALGVGIG VDYGIYIYTR LESFLRMGLP LQEAYYETLR
STGKAVLFTG LCLAIGVATW IFSAIKFQAD MGLMLTFMLL WNMFGALWLL PALARFLINP
AKLQARKASL FAH
|
|---|
| |