Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_24100 |
Symbol | xcpZ |
ID | 4381095 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 2091810 |
End bp | 2092334 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639324496 |
Product | general secretion pathway protein M |
Protein accession | YP_790078 |
Protein GI | 116051091 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3149] Type II secretory pathway, component PulM |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00000242731 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 64 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGTGA TGACGCAATT CCACGAGCGC CTCAGGGCCC AGGCGGAAAC CTCGCAGCTG GCGATCCGCT GGCGCGGGCT GCCGGCGCGG GACCGCCTGG CGCTGCTCTG GCTCGGTGCG TTCCTCCTGC TGGTGGTGCT CTACCTGGCG CTGTGGCGCC CGGCCGAGCG CCATCTGCAG TCGGCGCGGC AGTACTTCAC CGAACAGCGC GCGCTGCATG CCTACATCCA GCAGCAGGCG CCCAACGTGC GCCAGGCCGA TGCCGCGGCG CCACAGGCGC AGATCGACCC GGCGGCGCTG CAGGGCATGG TCACGGCTTC GGCGGCCCAG GCCGGACTGA GTGTCGAGCG CCTCGACAAC GAAGGCGAGG GCGCCGTGCA GGTGGCCCTG CAGCCGGCGC CATTCGCCAA GCTGCTGCCC TGGCTGGAGC AGTTGAACGG GCAGGGCGTG CAGGTGGCGG AGGCCGGCCT GGACCGCCAG GTCGACGGCC GGGTCTCGGC GCGCCTGAGC CTGCGGGTCG AGTGA
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Protein sequence | MKVMTQFHER LRAQAETSQL AIRWRGLPAR DRLALLWLGA FLLLVVLYLA LWRPAERHLQ SARQYFTEQR ALHAYIQQQA PNVRQADAAA PQAQIDPAAL QGMVTASAAQ AGLSVERLDN EGEGAVQVAL QPAPFAKLLP WLEQLNGQGV QVAEAGLDRQ VDGRVSARLS LRVE
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