Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_23900 |
Symbol | cvpA |
ID | 4381109 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 2077612 |
End bp | 2078154 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639324482 |
Product | hypothetical protein |
Protein accession | YP_790064 |
Protein GI | 116051105 |
COG category | [R] General function prediction only |
COG ID | [COG1286] Uncharacterized membrane protein, required for colicin V production |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.00157781 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCATTTA CCTGGGTCGA TTGGACGATG GTCGCCATCA TCGTCGTTTC CAGCCTGATC AGTCTGAGTC GCGGCTTCGT CAAGGAAGCC TTGTCCCTGC TTACCTGGAT AGTCGCCGGC GCGGTGGCCT GGATGTTCGG CGGGGCGCTG GCGCAGCACC TGGGCGAATA CATCCAGACC CCCTCGGCCC GCATCATCGC AGCCTGCGCG CTGCTGTTCA TCGCGACCCT GCTGCTCGGG GCGCTGGTCA ACTACCTCAT CGGCGAACTG ATCCGGGTCA CCGGCCTGTC CGGCACCGAC CGCTTCCTCG GCATGGTCTT CGGCGGCGCG CGCGGCGTAC TGCTGGTCGT GCTGCTGGTC GGCCTGCTCA GCCTGGCTCC GGTACAGCAG GACCCTTGGT GGCAGCAGTC GGTGCTGATG CCGCATTTCC TGATGGTCGC CGACTGGTCG AAGAACTTCA TTCTCGGTTT CGCCGGCCAG TGGTTGCCGG CCGCGCCGAT AACGCCGCCG AGCGGCATCG GCGGGCTGCT TCCCAGCCAG TGA
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Protein sequence | MAFTWVDWTM VAIIVVSSLI SLSRGFVKEA LSLLTWIVAG AVAWMFGGAL AQHLGEYIQT PSARIIAACA LLFIATLLLG ALVNYLIGEL IRVTGLSGTD RFLGMVFGGA RGVLLVVLLV GLLSLAPVQQ DPWWQQSVLM PHFLMVADWS KNFILGFAGQ WLPAAPITPP SGIGGLLPSQ
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