Gene PA14_23900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_23900 
SymbolcvpA 
ID4381109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2077612 
End bp2078154 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content66% 
IMG OID639324482 
Producthypothetical protein 
Protein accessionYP_790064 
Protein GI116051105 
COG category[R] General function prediction only 
COG ID[COG1286] Uncharacterized membrane protein, required for colicin V production 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.00157781 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCATTTA CCTGGGTCGA TTGGACGATG GTCGCCATCA TCGTCGTTTC CAGCCTGATC 
AGTCTGAGTC GCGGCTTCGT CAAGGAAGCC TTGTCCCTGC TTACCTGGAT AGTCGCCGGC
GCGGTGGCCT GGATGTTCGG CGGGGCGCTG GCGCAGCACC TGGGCGAATA CATCCAGACC
CCCTCGGCCC GCATCATCGC AGCCTGCGCG CTGCTGTTCA TCGCGACCCT GCTGCTCGGG
GCGCTGGTCA ACTACCTCAT CGGCGAACTG ATCCGGGTCA CCGGCCTGTC CGGCACCGAC
CGCTTCCTCG GCATGGTCTT CGGCGGCGCG CGCGGCGTAC TGCTGGTCGT GCTGCTGGTC
GGCCTGCTCA GCCTGGCTCC GGTACAGCAG GACCCTTGGT GGCAGCAGTC GGTGCTGATG
CCGCATTTCC TGATGGTCGC CGACTGGTCG AAGAACTTCA TTCTCGGTTT CGCCGGCCAG
TGGTTGCCGG CCGCGCCGAT AACGCCGCCG AGCGGCATCG GCGGGCTGCT TCCCAGCCAG
TGA
 
Protein sequence
MAFTWVDWTM VAIIVVSSLI SLSRGFVKEA LSLLTWIVAG AVAWMFGGAL AQHLGEYIQT 
PSARIIAACA LLFIATLLLG ALVNYLIGEL IRVTGLSGTD RFLGMVFGGA RGVLLVVLLV
GLLSLAPVQQ DPWWQQSVLM PHFLMVADWS KNFILGFAGQ WLPAAPITPP SGIGGLLPSQ