Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_23700 |
Symbol | |
ID | 4381124 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 2061055 |
End bp | 2061966 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639324467 |
Product | LysR family transcriptional regulator |
Protein accession | YP_790049 |
Protein GI | 116051120 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.0115342 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCGGC TTGAAGTCAA CCGTTCCGGC GAACTGGAGG TGTTTGCCCG GGTCGTCGAG TCGGGGGGCT TTTCCGCCGC CGCTCGACGT TGCGGCATGA CGCCCTCGGC AGTCAGCAAG CTGATCACCC GGCTCGAACA GCGCCTGGGA ACCCGCTTGC TGAACCGCTC CACCCGTCAA TTGCAACTGA CGCCCGAGGG ATGCACGTTC TACGAGCGCG GGGTGCGTAT CCTGGCCGAC CTGGAGGAAG CCGAGCGGTG TGCGAGCGAA AACGCGGCGC CGCGCGGGCG CTTGCGAGTC AACGCCAACG TGCCTTTCGG ACATCATTTC CTGCTGCCGC TGGTGCCCGA GTTCCTCGCG CAGCATCCCG AGGTGACGCT GGATATCGTG CTGACCGATG AGGTCGTCGA CATCCTCGAG CAGCGCACCG ACGTGGCCGT GCGCGCGGGG CCGCTGAAAA GCTCGAGCCT GGTGGCGCGC AAGCTGGGGA GCACGCGCAT GCTGATCGTC GGTGCGCCGG CCTACCTGGC CCGGCATGGC ATGCCGGCCA CGCCGCAGGC GCTGCTGGGG CACAACCGCC TCGGCGCCAA CTATGTGCGA ACGCGCTCCG GCTGGCCGCT GCGGGACGCC GGCGAGGAAC TCGTGGTGCC GTTGTCGGGC AACGCCCAGG CCAGCGATGG CGAGGCGCTG CGCCGTCTGG CCGTGGCCGG CCTGGGCCTG GCGCGGCTGG CCGCGTTCCA GGTGCGCGAG GACATAGCCG CCGGTCGCCT GATTCCCGTG CTCGAGGCAT ACAACCCGGG CGACCTGGAG GAAGTCCACG CCGTCTACGT CGGCCAGGGC GGCTATCTGC CGCTGCGCGT GCGGGCGTTC CTGAACTTTC TGGCGGAGCG CGTCGATATG AGCCAGGGTT GA
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Protein sequence | MARLEVNRSG ELEVFARVVE SGGFSAAARR CGMTPSAVSK LITRLEQRLG TRLLNRSTRQ LQLTPEGCTF YERGVRILAD LEEAERCASE NAAPRGRLRV NANVPFGHHF LLPLVPEFLA QHPEVTLDIV LTDEVVDILE QRTDVAVRAG PLKSSSLVAR KLGSTRMLIV GAPAYLARHG MPATPQALLG HNRLGANYVR TRSGWPLRDA GEELVVPLSG NAQASDGEAL RRLAVAGLGL ARLAAFQVRE DIAAGRLIPV LEAYNPGDLE EVHAVYVGQG GYLPLRVRAF LNFLAERVDM SQG
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