| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_23370 |
|---|
| Symbol | orfK |
|---|
| ID | 4381151 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 2028084 |
|---|
| End bp | 2029220 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 639324437 |
|---|
| Product | putative UDP-N-acetylglucosamine 2-epimerase |
|---|
| Protein accession | YP_790022 |
|---|
| Protein GI | 116051147 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0381] UDP-N-acetylglucosamine 2-epimerase |
|---|
| TIGRFAM ID | [TIGR00236] UDP-N-acetylglucosamine 2-epimerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000000000000715857 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.0071335 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCGAAAGA AGACTCTTTG TGTGTTTGGT ACGCGGCCGG AGGCTATCAA AATGGCCCCG
GTAACCCTGG CATTGGCGGA CGATGATCGT TTCGAGGCGA GGGTATGCGT TACCGGCCAG
CATCGTGAGA TGCTTGACCA AGTCTTGAAT CTCTTCAAGA TCGTCCCTGA CTTCGATCTC
AATATCATGC GTTCGGGGCA GGATCTGACT GATGTAACTG TTGCCATTCT GCAAGGAATG
AAAGACGTTT TCTCTCAGTT CAAGCCCGAT ATCGTTCTTG TCCATGGCGA TACAGCCACG
ACGTTGGCTG CTAGCCTTGC TGCTTATTAT CATCAGATCC CGGTTGCCCA TGTCGAGGCG
GGATTGCGGA CAGGGAACAT GTATTCTCCG TGGCCTGAAG AGGGCAATCG GAAATTAACT
GGTGCCTTAG CCTGTCTTCA CTTTGCTCCA ACGGAGACTT CTAGGGACAA CTTGCTTAGG
GAAGGGATAT CCGCCGAGCG AATTCGTGTG ACCGGAAATA CTGTTATCGA TGCCTTGTTA
AATGTTGTGC AACGCTTGGA GCAAGATATG GAGCTTGCCA GCGAGGCGGC GGCTCCGACT
GAGTTTCTTG ACTCCTCACG CAGGTTCATT CTTGTCACTG GCCATCGCCG TGAAAGCTTT
GGCGGAGGTT TCGAACGCAT CTGTCAAGCA CTGGGCGTGG TTGCAAGGAA TCACCCAGAG
ATCGATATTG TTTATCCCGT TCATCTGAAT CCGAATGTAC GAGAGCCGGT CAATCGTCTA
CTTTCAGATG TTCAGAACAT TCATCTTATA GAGCCGTTGG ACTATCTCCC TTTCGTTCAT
TTGATGAGCC GTGCTCATGT TATTCTCACC GATTCCGGTG GTATTCAGGA GGAAGCGCCT
TCGTTAGGTA AGCCCGTTTT GGTCATGCGG GAGACGACGG AGCGCCCGGA GGCTGTTGCC
GCAGGAACCG TCAAGTTGGT CGGGACAGAA ATCAAGAATA TAGTTAATGA GCTTGAGCGT
TTACTGGTAG ATGAATCTGC CTATCGAAAA ATGAGTTTTG CCCATAACCC TTACGGTGAT
GGAATGGCGA GTAAGCGAAT CATTGACAGC CTCTTGGATG CGAAGAGAGG CGAGTAA
|
|---|
| Protein sequence | MRKKTLCVFG TRPEAIKMAP VTLALADDDR FEARVCVTGQ HREMLDQVLN LFKIVPDFDL
NIMRSGQDLT DVTVAILQGM KDVFSQFKPD IVLVHGDTAT TLAASLAAYY HQIPVAHVEA
GLRTGNMYSP WPEEGNRKLT GALACLHFAP TETSRDNLLR EGISAERIRV TGNTVIDALL
NVVQRLEQDM ELASEAAAPT EFLDSSRRFI LVTGHRRESF GGGFERICQA LGVVARNHPE
IDIVYPVHLN PNVREPVNRL LSDVQNIHLI EPLDYLPFVH LMSRAHVILT DSGGIQEEAP
SLGKPVLVMR ETTERPEAVA AGTVKLVGTE IKNIVNELER LLVDESAYRK MSFAHNPYGD
GMASKRIIDS LLDAKRGE
|
|---|
| |