Gene PA14_23250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_23250 
SymbolmtnA 
ID4381162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp2013441 
End bp2014517 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content68% 
IMG OID639324426 
Productmethylthioribose-1-phosphate isomerase 
Protein accessionYP_790011 
Protein GI116051158 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0182] Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family 
TIGRFAM ID[TIGR00512] S-methyl-5-thioribose-1-phosphate isomerase
[TIGR00524] eIF-2B alpha/beta/delta-related uncharacterized proteins 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.0078361 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGAGAGC GACTGCTGGC GGCCGAGCGG GTCAAGGCGA TCGAGTGGCG GGACGGTACG 
CTGCGGTTGC TGGATCAGCG CCTGCTGCCC CAGGAGGAGG TCTGGCTCGA ACATGAGTCG
GCGGCCGAGG TGGCCAAGGC CATTCGCGAT ATGGTCGTGC GCGGCGCGCC GGCCATCGGC
ATCAGCGCCG CCTACGGCAT CGTCCTTGGC GCCCGCGCGC GCCTGGCGCA GGGCGGCGAC
TGGCGCGCCG CGCTGGAGGA GGACTTCCGC CTGCTGGCCG ACTCGCGACC CACGGCGGTC
AACCTGTTCT GGGCGCTGAA CCGCATGCGC GACCGTCTGG AGCGAATGAA AGAGGGCGAC
CAGCCGCTGG CGGTGCTGGA AGCCGAGGCG ATCTCCATCC ATGAAAGCGA CCGCGAGGCC
AACCTGACCA TGGCCCAGTT GGGCATGGAG CTGATCCGCA AGCAGCAGGG CAGCCCGCAG
AACATCCTCA CCCACTGCAA TACCGGCGCC CTGGCGACCG GCGGGTTCGG CACCGCGCTG
GGGGTGATCC GCGCCGCGCA CCTGGAAGGC CTGGTCAATC GCATCTACGC CGACGAAACC
CGGCCCTGGC TCCAGGGCTC GCGGCTGACC GCTTGGGAAC TGGCCAACGA AGGCATCCCG
GTCAGCCTGA ACGTGGATTC GGCCGCCGCG CACCTGATGA AGACCGAGAA CATCACCTGG
GTCATCGTCG GCGCCGACCG CATCACCGCC AATGGCGATG TCGCCAACAA GATCGGCACC
TACCAGTTGG CAGTCAACGC CATGCACCAC GGCGTGCGCT TCATGGTGGT GGCGCCGAGT
TCGACCATCG ACATGAACCT GGAGAGCGGC GAGGACATCC CGATCGAAGA GCGCGACGGT
CGCGAACTGC TGGAAATCGG CGGGCGACGG GTGGCGGCCG AGGTCGATGC CTACAATCCG
GTATTCGACG TGACCCCGGC GGACCTTATC GATGCCATCG TGACCGAGCG TGGCGTCGTC
GAGCGTCCCG ACGCCGAGCG CATGGCCGCC CTGATGAGCC GCAAGCGCCT GCATTGA
 
Protein sequence
MRERLLAAER VKAIEWRDGT LRLLDQRLLP QEEVWLEHES AAEVAKAIRD MVVRGAPAIG 
ISAAYGIVLG ARARLAQGGD WRAALEEDFR LLADSRPTAV NLFWALNRMR DRLERMKEGD
QPLAVLEAEA ISIHESDREA NLTMAQLGME LIRKQQGSPQ NILTHCNTGA LATGGFGTAL
GVIRAAHLEG LVNRIYADET RPWLQGSRLT AWELANEGIP VSLNVDSAAA HLMKTENITW
VIVGADRITA NGDVANKIGT YQLAVNAMHH GVRFMVVAPS STIDMNLESG EDIPIEERDG
RELLEIGGRR VAAEVDAYNP VFDVTPADLI DAIVTERGVV ERPDAERMAA LMSRKRLH