Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_22940 |
Symbol | gltR |
ID | 4381185 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 1989608 |
End bp | 1990336 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639324403 |
Product | two-component response regulator GltR |
Protein accession | YP_789988 |
Protein GI | 116051181 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 0.281067 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGCGA ACGGACGATC GATCCTGCTG GTGGACGATG ACCAGGAGAT CCGCGAATTG CTGGAGACCT ACCTGAGCCG CGCCGGCTTC CAGGTCCGCA GCGTCTCGCG GGGCGCCGAC TTCCGCCAGG CGCTGTGCGA GGAGGAGGCG AGCCTGGCGA TCCTCGACGT GATGCTGCCG GACGAGGACG GCTTCAGCCT CTGTCGCTGG ATTCGCTCCC ACCAGCGCCT GGCCTGCATG CCGATCATTA TGCTCACCGC CAGTTCCGAC GAGGCCGACC GGGTGATCGG CCTGGAACTG GGCGCCGACG ACTACCTGGG CAAGCCGTTC AGCCCGCGCG AGCTGCTGGC GCGGATCAAG GCCCTGCTGC GCCGCGCGCA GTTCACCCAG GTGCGCGGTG GCGACGTACT GGCCTTCGAG GACTGGCGAC TGGATACGGT CAGCCACCGG CTGTTCCACG AGGACGGCGA GGAGTTCTTC CTCAGCGGCG CGGATTTCGC CCTGCTCAAG CTGTTCCTCG ACCATCCGCA GCAGATCCTC GACCGCGACA CCATCGCCAA CGCCACCCGC GGCCGCGAGG TGCTGCCGCT GGAGCGCATC GTCGACATGG CGGTCAGCCG CCTGCGCCAG CGCCTGCGCG ACACCGGCAA GGCGCCGCGG CTGATCCAGA CCGTGCGCGG CAGTGGCTAC CTGCTGGCGG CGCAGGTGCG GCCGCACCTG CAGCCATGA
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Protein sequence | MSANGRSILL VDDDQEIREL LETYLSRAGF QVRSVSRGAD FRQALCEEEA SLAILDVMLP DEDGFSLCRW IRSHQRLACM PIIMLTASSD EADRVIGLEL GADDYLGKPF SPRELLARIK ALLRRAQFTQ VRGGDVLAFE DWRLDTVSHR LFHEDGEEFF LSGADFALLK LFLDHPQQIL DRDTIANATR GREVLPLERI VDMAVSRLRQ RLRDTGKAPR LIQTVRGSGY LLAAQVRPHL QP
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