| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_22470 |
|---|
| Symbol | |
|---|
| ID | 4383130 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 1955624 |
|---|
| End bp | 1956553 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639324363 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_789948 |
|---|
| Protein GI | 116051221 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.0122765 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.000000469703 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCGC CACGCGTAAC CCTGGACCAA TGGCGGACCC TGCAGGCGGT GGTCGACCAC
GGCGGCTTCG CCCAGGCCGC GGAAGCCCTG CACCGCTCGC AATCGTCGAT CAGCTATACC
GTGGCGCGCA TGCAGGAACA GCTCGGCGTG CCGCTGCTGC GCATCGACGG ACGCAAGGCG
GTGCTGACCG AGGCCGGCGA AGTGCTGCTG CGCCGCTCGC GGCAACTGGT CAAGCAGGCC
GGGCAACTGG AGGAACTGGC CCACCACATG GAACAGGGCT GGGAGCCCGA GGTGCGTCTG
GTGGTGGACG CCGCCTACCC CACCGCGCGG ATCGTCCGCT CGCTGTCCGC CTTCATGCCG
CAGAGCCGCG GCTGTCGCGT GCTGCTGCGC GAGGAAGTGC TCTCCGGCGT CGAGGAAGCG
CTGATCCAGG GCGCCGCCGA CCTGGCGATC AGCGGCCTGA TCATTCCCGG CCACCTCGGC
GCCGACCTCA GCGTGGTCGA GTTCGTCGCC GTGGCCCACC CCGACCATCC GCTGCACCGC
CTGCAACGCG AGCTGACCCA CCAGGACCTG GAAACCCAGA TGCAGGTGGT GATCCGCGAC
AGCGGCCGGC TACAGCCGCG CGACCACGGC TGGCTCGGCG CCGAACAGCG CTGGACGGTG
GGCAGCCTGG CTACCGCGGC GACCTTCGTC GGCAACGGCC TGGGCTTCGC CTGGCTGCCG
CGACACATCA TCGAGCGCGA ACTGCAGAGC GGCCAACTCA AGCCGCTGCC GCTGAGCCAG
GGCGGCGTGC GGCAGAGCCG CTTCTACCTC TACACCAACA AGGAGAAGCC GCTCGGCCCG
GCCAGCCAGA TCCTCATGGA AATGCTCAAG TCGTTCGCCA ACGTACCGCT CAACGCGCCC
TTCGCGGCGC CCGAACCGGC CGCCGAGTGA
|
|---|
| Protein sequence | MKAPRVTLDQ WRTLQAVVDH GGFAQAAEAL HRSQSSISYT VARMQEQLGV PLLRIDGRKA
VLTEAGEVLL RRSRQLVKQA GQLEELAHHM EQGWEPEVRL VVDAAYPTAR IVRSLSAFMP
QSRGCRVLLR EEVLSGVEEA LIQGAADLAI SGLIIPGHLG ADLSVVEFVA VAHPDHPLHR
LQRELTHQDL ETQMQVVIRD SGRLQPRDHG WLGAEQRWTV GSLATAATFV GNGLGFAWLP
RHIIERELQS GQLKPLPLSQ GGVRQSRFYL YTNKEKPLGP ASQILMEMLK SFANVPLNAP
FAAPEPAAE
|
|---|
| |