| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_18920 |
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| Symbol | |
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| ID | 4381474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 1630889 |
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| End bp | 1633213 |
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| Gene Length | 2325 bp |
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| Protein Length | 774 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639324068 |
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| Product | electron transport complex protein RnfC |
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| Protein accession | YP_789656 |
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| Protein GI | 116051508 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4656] Predicted NADH:ubiquinone oxidoreductase, subunit RnfC |
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| TIGRFAM ID | [TIGR01945] electron transport complex, RnfABCDGE type, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000329645 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.0619935 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCCC TGCACGCCTT CCCCGGTGGC CTCTGCCTGC CGGCCAACAA GGAGCGCTCC
ACCGCCCTGC CGATCCAGCA GGCGCCGCTG GCGCAGCGCT ACATCGTGCC GCTCGGCCAG
CACATGGGCG CGCCGGCGCG GCCTTGCGTG GAAGTCGGCC AGGCCGTGCT CAAAGGCCAG
ACCATCGCCC TCCCGGACGG CACCGTCAGC GCCGCGCTGC ATGCCCCGAC CTCGGGGACC
GTGGTGGCGA TCGGCGCACA CCCCTATCCG CATGCCTCCG GTCTTCCCGC GCCGGCCATC
GTCATCGCCA GCGACGGCCT GGAGCGCTGG ACCGAGCTGC ATCCCTGCCC GGACTTCCGC
GCCGAAAGCC CGCTGGCGCT GCTCGAACGT ATCCGCGCGG CCGGCATCGG CGGTCTCGGC
GGCGCCGGCT TCCCCACCGC CGCCAAGCTC GCCGCGCGCC CGGCGGACAA GATCCATACG
CTGGTGGTGA ACGGCGCCGA ATGCGAGCCC TACATCAGCG CCGACGACCT GCTCATGCGC
GAGCGCGCCA CGCAGGTGCT GAGCGGCATC GATATCCTGG TGCAGATCCT GCGCCCCGAA
GAGGTGCTGG TCGGCATCGA GGACGACAAG CCGGAAGCCA TCGCCGCCCT CGGCGCCGCC
CTCGGTGAAC GGCCCTATCG CATCGTCGCC CTGCCGACCC GCTATCCCTC GGGCGGCGAG
CGCCAGCTGA TCCAGTTGCT CACCGGCAGG GAAGTCCCCG CGGACGGCCT GCCGGCGGAC
ATCGGCATCC TGTGCCAGAA CGTCGGCACC CTGGCCGCCG TGCACGATGC CGTCGTCCTC
GGTCGGCCGC TGATCTCGCG GATCACCACC CTCGCCGGCG GCGCCCTGGA GCGGCCGATG
AACGTCGAGG CGCTGATCGG CACGCCGGTG CACGAGCTGC TGGCGTTCGC CGGCCTCGCC
GAGGGACGCC TGGAACGCGT GCTGATGGGC GGGCCGATGA TGGGCTTCGC CCTGCCCGAT
CTCTCGGTGC CGCTGATCAA GACCTGCAAC TGCCTGCTCG CCGGCGATGC CACGGAGCTG
CCGGAACCAG TGCCGGCCAT GCCCTGTATC CGCTGCGGCG ACTGCGCCCG GGTCTGCCCC
GTCAGCCTGC TGCCACAACA ACTGCATTTC TTCGCCCTGG GCGACGAGCA CGAGCAATTG
CTCGCCCACA ACCTGTTCGA TTGCATCGAA TGCGGCGCCT GCGCCTACGT CTGCCCGTCG
AGCATTCCCT TGGTGCAGTA CTACCGCGCG TCCAAGGCGG AAATCCGCGA GCAGCGGCAG
AAGCTGCTGA AGGCCGAACA GTCCCGCGAG CGTTTCGAGC AACGCCAGGC TCGCCTGCGC
CGCGACGAGG AACGCCGGGC CGCAGAACGC GCCCAACGCG CCGAGAAGGC CGCGCGGGCG
CGCGCCGCCC AGACCGAGCG CGAGGAAGCC GCCCCCGCCA CGGCGGTCGA CCCGGTGCAG
GCGGCGATCG AGCGGGCCAG GGCGCGCAAG CAGGCCGGTA GCGGCAGCGA ACGGCTGAAA
CGGCTGAAGA TCGAAGCGAG CATGGCGCGG GTGGCGCTGA AGAAGGCCGA GAAACAGTTG
CTCAGCCACG ACACCCCGGA ACAGCATGGC CTGGTCGCGG AACTGCGCGC CGCCGCCGAG
GCCGCCGACA AGGCCCTGGC CGATGCCGAA GCCAGCCTGC CGCGCGACCT ACCCAGCGCA
CCGCCTGCCG CGCTCGACGA CGAAGCCGAA CTGAAGAAGG CCAAGGCCCA GGCCGCCATG
GCCCGCGCCC AGCTCAAGCG CTCGGAAAAG GCCTTCGGCG AAGCGCCCGG CGCCGAACAG
CGGGCGACCC TCGACGAACT GCGCGCCGAG GTCGAGCGTT GCGAAGCCAC CCTGGCCCGC
CTCGAGCGTC ACGCGCCGAA GCCCGCGGCG CCCGGCGACG ACGGCCAGGC GGCGCTGAAG
CGGGCGAAGA TCGCCCTGGT CGGCAAGCGC GCGGCCTTGA AGAAGGCCGA GCAGGCCGGG
GTGATGGACA GCGAGCTGGA ACGCCTGCGC GGCGAGCTGC AAGCCGCCGA GCGCGACCTG
CATGCCGCCG AGGACGCCTG CGGCAAGCCG GCGCCGGAGC TGGTGCGGAT CGACAAGCGC
CCGGTCGACC CGCGCACCCG CGAGCTGAAG ACCGAGCTGG CCTACGCCCG CGCCGCCCTG
AAGAAGCTCG AACGCCTGGC GAACGCCGAC CCCGCCGCAC TCGCCGCCGC CCGCGCGCGC
CTGAGCGCCG CCGAGCGCGC CCTGACCGAA CACGGTACGG AGTGA
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| Protein sequence | MSALHAFPGG LCLPANKERS TALPIQQAPL AQRYIVPLGQ HMGAPARPCV EVGQAVLKGQ
TIALPDGTVS AALHAPTSGT VVAIGAHPYP HASGLPAPAI VIASDGLERW TELHPCPDFR
AESPLALLER IRAAGIGGLG GAGFPTAAKL AARPADKIHT LVVNGAECEP YISADDLLMR
ERATQVLSGI DILVQILRPE EVLVGIEDDK PEAIAALGAA LGERPYRIVA LPTRYPSGGE
RQLIQLLTGR EVPADGLPAD IGILCQNVGT LAAVHDAVVL GRPLISRITT LAGGALERPM
NVEALIGTPV HELLAFAGLA EGRLERVLMG GPMMGFALPD LSVPLIKTCN CLLAGDATEL
PEPVPAMPCI RCGDCARVCP VSLLPQQLHF FALGDEHEQL LAHNLFDCIE CGACAYVCPS
SIPLVQYYRA SKAEIREQRQ KLLKAEQSRE RFEQRQARLR RDEERRAAER AQRAEKAARA
RAAQTEREEA APATAVDPVQ AAIERARARK QAGSGSERLK RLKIEASMAR VALKKAEKQL
LSHDTPEQHG LVAELRAAAE AADKALADAE ASLPRDLPSA PPAALDDEAE LKKAKAQAAM
ARAQLKRSEK AFGEAPGAEQ RATLDELRAE VERCEATLAR LERHAPKPAA PGDDGQAALK
RAKIALVGKR AALKKAEQAG VMDSELERLR GELQAAERDL HAAEDACGKP APELVRIDKR
PVDPRTRELK TELAYARAAL KKLERLANAD PAALAAARAR LSAAERALTE HGTE
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