Gene PA14_18340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_18340 
Symbol 
ID4381519 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp1573236 
End bp1574123 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content74% 
IMG OID639324022 
Producthypothetical protein 
Protein accessionYP_789610 
Protein GI116051553 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.297972 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCCAGG CCGGCCTGCG CATCGACGTC GACACCTTCC GCGGCACCCG CGACGGGGTG 
CCGCGGCTGC TCGACCTGCT CGACGAAGCC GGGCTGAAGG CGACCTTCTT CTTCAGCGTC
GGCCCGGACA ACATGGGCCG CCACCTCTGG CGCCTGGCGC GCCCGGCGTT CTTCTGGAAG
ATGCTCCGCT CGCGCGCCGC CAGCCTGTAT GGCTGGGACA TCCTGCTGGC CGGCACCGCC
TGGCCGGGCA AGCCGATCGG CCGCGAACTC GGCCCGCTGA TGCGGCGGAC CCAGGCCGCC
GGCCACGAGG TCGGCCTGCA CGCCTGGGAC CACCATGCCT GGCAGACCCA CGTCGGCGTC
TGGAGCGCGC AGCAGCTCGG CGAGCAGATC CGCCGCGGCA GCGATTGCCT GGCGGACATC
CTCGGCCAGC CGGTGCGTTG TTCCGCCGCC GCCGGCTGGC GCGCCGATGG CCGGGTGGTC
GAGGCCAAGC AGCCCTTCGG CTTCCGCTAC AACAGCGACT GCCGCGGACG CGGCGCGTTC
CGCCCGCGCC TGGCCGACGG CAGCCCCGGC ATCCCGCAGG TGCCGGTGAA CCTGCCGACC
TTCGACGAGG TGGTCGGTCC CGGCCTGCCG CGCGAGGCCT ACAACGACTT CATCCTGGAA
CGCTTCGCCG CTGGCCGCGA CAACGTCTAC ACCATCCACG CCGAGGTCGA GGGGCTGCTC
CTCGCCCCGG CGTTCCGCGA ACTGCTGCGG CGCGCCGAAC GGCGTGGCAT CCGCTTCCGC
CCGTTGGGCG AACTGCTGCC GGACGATCCG CGCAGCCTGC CGCTGGCCGA ACTGGTGCGC
GGCCGCCTGG CCGGCCGCGA GGGCTGGCTG GGAGTGCGCC AGCCATGA
 
Protein sequence
MIQAGLRIDV DTFRGTRDGV PRLLDLLDEA GLKATFFFSV GPDNMGRHLW RLARPAFFWK 
MLRSRAASLY GWDILLAGTA WPGKPIGREL GPLMRRTQAA GHEVGLHAWD HHAWQTHVGV
WSAQQLGEQI RRGSDCLADI LGQPVRCSAA AGWRADGRVV EAKQPFGFRY NSDCRGRGAF
RPRLADGSPG IPQVPVNLPT FDEVVGPGLP REAYNDFILE RFAAGRDNVY TIHAEVEGLL
LAPAFRELLR RAERRGIRFR PLGELLPDDP RSLPLAELVR GRLAGREGWL GVRQP