Gene PA14_17880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_17880 
Symbol 
ID4381553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp1534832 
End bp1536037 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content72% 
IMG OID639323987 
Productacetyl-CoA acetyltransferase 
Protein accessionYP_789575 
Protein GI116051587 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases
[TIGR02430] beta-ketoadipyl CoA thiolase 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGATG CCTATATCTA CGCCGGCCTG CGTACGCCTT TCGGCCGGCA TGCCGGTGCA 
CTCTCGACGG TGCGTCCGGA CGACCTGGCC GGCCTGCTGC TGGCGCGTCT CGCGGAAACC
TCCGGGTTCG CCGTCGACGA CCTGGAGGAT GTGATCCTCG GTTGCACCAA CCAGGCCGGC
GAAGACAGCC GCAACCTGGC GCGCAACGCG CTGCTCGCAG CCGGCCTGCC GGCGCGGCTG
CCTGGGCAGA CGGTCAACCG CTTGTGTGCC AGCGGACTGT CGGCGGTGAT CGACGCGGCG
CGCGCGATCA GTTGCGGCGA GGGCCGGCTG TACCTGGCCG GCGGCGCCGA AAGCATGTCC
CGGGCGCCGT TCGTCATGGG CAAGGCGGAG AGCGCCTTCA GCCGCACGCT GGAGGTCTTC
GACAGCACCA TCGGCGCGCG CTTCGCCAAC CCCAGGCTGG TCGAGCGCTA TGGCAACGAC
AGCATGCCGG AGACCGGCGA CAACGTGGCC CGCGCCTTCG GCATCGCCCG CGAGGATGCC
GACCGTTTCG CCGCTTCTTC CCAGGCGCGC TACCAGGCTG CGCTGGAGGA GGGCTTTTTC
CTCGGCGAAA TCCTTCCGGT GGAGGTGCGC GCCGGACGCA AGGGCGAGAC GCGGCTGGTG
GAGCGCGACG AGCATCCGCG GCCGCAGGCC GACCTGGCGG CCCTGGCGCG CTTGCCGGCG
TTGTTCGCCG GCGGGGTAGT GACCGCCGGC AACGCGTCGG GGATCAACGA CGGGGCGGCG
GTAGTGCTGC TGGGCGACCG CGCGATCGGC GAGCGCGAGG GCATCCGGCC GCTGGCGCGG
ATCCTCGCTA GCGCCAGCGT CGGCGTGGAG CCCCGGTTGA TGGGCATCGG CCCGCAGCAG
GCGATCCTCC GCGCGCTGCA ACGCGCCGGC ATCGACCTGG ACGAGGTCGG CCTGATCGAG
ATCAACGAAG CCTTCGCGCC GCAGGTCCTG GCCTGCCTGA AGCTGCTCGG CCTGGACTAC
GAGGACCCGC GGGTCAATCC CCATGGCGGC GCCATCGCCC TCGGCCATCC GCTCGGCGCC
TCCGGTGCGC GCCTGGTGCT CACCGCCGCC CGCGGGCTGC AACGCATCGA GCGGCGCTAC
GCGGTGGTCA GCCTGTGCGT CGGGCTCGGC CAGGGCGTGG CGATGGTGAT CGAGCGCTGC
CGATGA
 
Protein sequence
MLDAYIYAGL RTPFGRHAGA LSTVRPDDLA GLLLARLAET SGFAVDDLED VILGCTNQAG 
EDSRNLARNA LLAAGLPARL PGQTVNRLCA SGLSAVIDAA RAISCGEGRL YLAGGAESMS
RAPFVMGKAE SAFSRTLEVF DSTIGARFAN PRLVERYGND SMPETGDNVA RAFGIAREDA
DRFAASSQAR YQAALEEGFF LGEILPVEVR AGRKGETRLV ERDEHPRPQA DLAALARLPA
LFAGGVVTAG NASGINDGAA VVLLGDRAIG EREGIRPLAR ILASASVGVE PRLMGIGPQQ
AILRALQRAG IDLDEVGLIE INEAFAPQVL ACLKLLGLDY EDPRVNPHGG AIALGHPLGA
SGARLVLTAA RGLQRIERRY AVVSLCVGLG QGVAMVIERC R