| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_17440 |
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| Symbol | truD |
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| ID | 4381589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 1495581 |
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| End bp | 1496648 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639323950 |
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| Product | tRNA pseudouridine synthase D |
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| Protein accession | YP_789538 |
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| Protein GI | 116051623 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0585] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00094] tRNA pseudouridine synthase, TruD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTTC TCGGCGAACT CGACTTGCTC GGGCCGCGCG CCCATGGGGC AGCCTGCGGC
GAGGCGGTGC TCAAGGCCGT GGCCGAGGAC TTCCAGGTCG ACGAGGTGCT GGACATTCCC
CTCAGCGGTG AAGGCGAGCA CCTCTGGTTG TGGGTGGAAA AGCGCGGATT GAACACCGAG
GAGGCGGCCC GTCGCCTCGG CCGCGCCGCC GGCGTGCAGC AGAAGAACGT CAGCTACGCC
GGGTTGAAGG ACCGCCAGGC CCTGACCCGG CAATGGTTCA GCCTGCACCT GCCGGGCAAG
GCCGATCCCG ACCTGGGCGC AGCCGAGGGC GCGGACCTGC GGATTCTTCG CCGCACCCGT
CATTCGCGCA AGTTGCAGCG AGGCGCGCAT GCCGCCAACG GCTTCACCCT GCGTCTGACC
GGGCTGCGGG CGGAGCGTGC CCTTCTCGAC GCGCGCTTGG AACGTATCGC CGCGGACGGC
GTGCCCAACT ATTTCGGCCT GCAACGCTTC GGCCACGGCG GCGGCAACCT GGTCGACGCG
CGCAGTTGCG CGGAACAGGA CCTGCTGCCG GCGAACCGCA ACCTGCGTTC GCGCTTCCTT
TCCGCCGGGC GCAGCTACCT GTTCAACCGC CTGCTCGCCG AGCGGGTCGC GGAGGGTAGC
TGGAACCGGG CAGCGGTTGG CGACCTGCTG GCCTTCACCG ACAGCCGCAG CTTTTTCCTC
GCTGGCGAGG AAGAATGCCG CGATGCCCGT CTGGCCGCCC TCGACCTGCA CCCCACCGGA
CCGCTCTGGG GCGAGGGCGA TCCGCCGAGC GGCGCCGGCG TCCTCGACCG CGAGCTGGCC
CTGGCCGGGA GCGAGCCGGC GCTCTGCCGC TGGCTGGCGA AGGCGGGCAT GGCGCACGAA
CGGCGCATCC TGCGGCTCCC CATCCAGGGG CTGGCGTGGC ATTATCCCGA ACCTGATGTT
CTGCAACTGG AATTCGTCCT GCCGGCCGGT TGTTTCGCCA CCGTAGTGGT GCGTGAAATC
CTCGACCTGG TACCGACAGG GCAGACGGAA AACCCATGCG CATACTGA
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| Protein sequence | MSVLGELDLL GPRAHGAACG EAVLKAVAED FQVDEVLDIP LSGEGEHLWL WVEKRGLNTE
EAARRLGRAA GVQQKNVSYA GLKDRQALTR QWFSLHLPGK ADPDLGAAEG ADLRILRRTR
HSRKLQRGAH AANGFTLRLT GLRAERALLD ARLERIAADG VPNYFGLQRF GHGGGNLVDA
RSCAEQDLLP ANRNLRSRFL SAGRSYLFNR LLAERVAEGS WNRAAVGDLL AFTDSRSFFL
AGEEECRDAR LAALDLHPTG PLWGEGDPPS GAGVLDRELA LAGSEPALCR WLAKAGMAHE
RRILRLPIQG LAWHYPEPDV LQLEFVLPAG CFATVVVREI LDLVPTGQTE NPCAY
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