| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_16820 |
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| Symbol | |
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| ID | 4381600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 1438753 |
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| End bp | 1441830 |
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| Gene Length | 3078 bp |
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| Protein Length | 1025 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639323900 |
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| Product | putative efflux transmembrane protein |
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| Protein accession | YP_789488 |
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| Protein GI | 116051673 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.522228 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTTCA ACCTTTCCGC CTGGGCGTTG CAGAATCGCC AGATCGTCCT GTACCTGATG
ATCCTGCTTG GCGCGGTTGG CGCGCTGTCC TACAGCAAGC TGGGGCAGAG CGAAGACCCG
CCGTTCACCT TCAAGGCCAT GGTGGTGCAG ACCAACTGGT CGGGTGCCAG CGCCGAAGAG
GTGGCCCGGC AGGTCACCGA GCGTATCGAG AAGAAGCTGA TGGAAACCGG CGACTACGAT
CGCATCGTGT CCTTCTCCCG CCCCGGCGTC TCGCAGGTGA CCTTCATGGC CCGCGAGGAC
ATCCATTCCA GCGAGATCCC CGAACTCTGG TACCAGATCC GCAAGAAGAT CAGCGACATT
CGCGCCACCT TGCCGCAAAG CATCCAGGGC CCGTTCTTCA ACGACGAGTT CGGCACCACC
TACGGCAACA TCTATGCGCT CACCGGCAAG GGCTTCGACT ATGCGGTGAT GAAGGACTAT
GCCGACCGCC TGCAACTGCA ATTGCAGCGG ATCAGGAACG TCGGCAAGGT CGAACTGATC
GGCCTGCAGG ACGAGAAGAT CTGGATCGAC CTGTCCAACA CCAAGCTGGC CACCCTCGGC
CTGCCCCTGG CGGCGGTGCA GAAGGCGCTG GAGGAACAGA ACGCGGTGGC CTCCTCCGGG
TTCTTCGAGA CCGCCAGCGA CCGCGTGCAA TTGCGCGTTT CCGGGCGTTT CGATTCGGTG
GAGGAGATCC GCGACTTCCC CATCCGCGTC GGCGACCGCA CCTTCCGCAT CGGCGACGTG
GCCGAGGTTC GCCGCGGCTT CAACGATCCG CCGGCGCCGC GCATGCGCTT CATGGGCGAG
GACGCCATCG GCCTGGCGGT AGCGATGAAG CCGGGCGGCG ACATCCTGGT GCTGGGTAAG
GCCCTGGAAA CCGAGTTCGC CCGCCTGCAG CAGTCGCTGC CGGCCGGACT GGAACTGCGC
AAGGTGTCCG ACCAGCCGGC GGCGGTACGT ACTGGGGTCG GCGAGTTCAT CCGGGTGCTG
GCCGAGGCGC TGGTGATCGT CCTGCTGGTG AGCTTCTTCT CCCTCGGCCT GCGCACAGGC
CTGGTGGTGG CGCTGTCGAT CCCGCTGGTG CTGGCGATGA CCTTCGCCGC CATGCATTAC
TTCGGCATCG GCCTGCACAA GATTTCCCTC GGTGCCCTGG TGCTGGCGCT GGGATTGCTG
GTGGACGACG CGATCATCGC GGTGGAGATG ATGGCGGTGA AGATGGAGCA GGGCTACGAC
CGCCTCAAGG CGGCCAGCTT CGCCTGGACC AGCACCGCCT TCCCGATGCT CACCGGCACC
CTGATCACCG CCGCCGGCTT CCTGCCGATC GCCACCGCGC AGTCCGGCAC CGGCGAATAC
ACCCGCTCGC TGTTCCAGGT GGTGACCATC GCCCTGGTGG TCTCCTGGTT CGCCGCGGTG
GTCTTCGTTC CCTACCTGGG GGCCAAGCTG CTGCCGGACC TGGCCAGGCT GCACGCGCAG
AAGCACGGCG GCAGCGCCGA CGGCTACGAT CCCTATGCAA CGGCCTTCTA CCAGCGCTTC
CGGCGTCTGG TGGAGTGGTG CGTGCGCTAC CGCAAGACGG TGATCGTCCT GACCCTCGCC
GCCTTCGTCG GCGCGCTGCT GCTGTTCCGC CTGGTGCCGC AGCAGTTCTT CCCGCCCTCG
GCGCGCCTGG AGCTGCTGCT GGACATCAAG CTGGCCGAGG GCGCCTCGCT GCGCTCGACC
GGCGAGGAAG TCCAGCGCCT GGAAAAAATG CTGCAGGGCC ATGACGGCAT CGACAACTAC
GTGGCCTACG TCGGCACCGG CTCGCCCCGC TTCTACCTGC CGCTGGACCA GCAGTTGCCG
GCGGCCAGCT TCGCCCAGGT GGTGGTGCTG GCCAAGGACC TGGAGAGCCG CGAGGCGCTG
CGCAAGTGGC TGATCGAGCG GATGAACGAG GACTTCCCGC ACCTGCGCAG CCGCATCAGT
CGCCTGGAGA ACGGGCCGCC GGTGGGCTAT CCGGTGCAGT TCCGGGTTTC CGGCGAGGAC
ATCCCGCAGG TTCGCGAACT GGCGCGCAAG GTCGCCGACA GGATGCGCGA GAACCCGCAC
GTGGTGAATG TGCACCTGGA TTGGGAAGAG CCGAGCAAGG TGGTGTACCT GAGCATCGAC
CAGGAGCGCG CCCGTGCCCT GGGGGTGAGC ACCGCCAGCC TGTCGCAGTT CCTGCAGAGC
GCGCTGACCG GTTCGCATGT GAGCTTCTTC CGCGAAGACA ACGAGCTGAT CGAGATCCTC
CTGCGCGGCA CCGAGCAGGA GCGTCGCGAC CTGTCGTTGC TGCCGAGCCT GGCGGTGCCG
ACCGAGAATG GCCGGAGCGT GGCGCTGTCG CAGATCGCCA CGCTCGAATA CGGTTTCGAA
GAGGGGATCA TTTGGCACCG CAACCGCCTG CCGACGGTCA CCGTGCGCGC CGATATCTAC
GACGATTCGC TGCCGGCGAC CCTGGTCGCG CAGATCGCCC CGACCCTGGA ACCGATCCGC
GCCGAGCTGC CGGACGGCTA CCTGCTGGAG GTGGGCGGAA CGGTGGAGGA CGCGGCGAAG
GGCCAGAGTT CGGTGAACGC TGGCGTGCCG CTGTTCATCG TGGTGGTGTT GAGCCTGCTG
ATGGTGCAGT TGCGCAGCTT CTCGCGGATG GCGATGGTAT TCCTCACCGC ACCGCTGGGC
CTGATCGGCG TGACCCTGTT CCTGCTGCTG TTCCGCCAGC CGTTCGGCTT CGTGGCGATG
CTCGGGACCA TCGCCCTGGC CGGCATGATC ATGCGCAACT CGGTGATCCT GGTGGACCAG
ATCGAACAGG ACATCAGCCA TGGACTGGAT CGCTGGCACG CCATCATCGA GGCTACCGTG
CGGCGTTTCC GGCCCATCGT GCTGACCGCG CTGGCGGCGG TGCTGGCGAT GATCCCGCTG
TCGCGCAGCG TATTCTTCGG GCCGATGGCG GTGGCGATCA TGGGCGGGCT GATCGTCGCC
ACCGTGCTCA CCCTGCTGTT CCTGCCGGCG CTCTATGCCG CCTGGTTCCG TGTGAAGAAG
GACGAGGCGC GGGCCTGA
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| Protein sequence | MSFNLSAWAL QNRQIVLYLM ILLGAVGALS YSKLGQSEDP PFTFKAMVVQ TNWSGASAEE
VARQVTERIE KKLMETGDYD RIVSFSRPGV SQVTFMARED IHSSEIPELW YQIRKKISDI
RATLPQSIQG PFFNDEFGTT YGNIYALTGK GFDYAVMKDY ADRLQLQLQR IRNVGKVELI
GLQDEKIWID LSNTKLATLG LPLAAVQKAL EEQNAVASSG FFETASDRVQ LRVSGRFDSV
EEIRDFPIRV GDRTFRIGDV AEVRRGFNDP PAPRMRFMGE DAIGLAVAMK PGGDILVLGK
ALETEFARLQ QSLPAGLELR KVSDQPAAVR TGVGEFIRVL AEALVIVLLV SFFSLGLRTG
LVVALSIPLV LAMTFAAMHY FGIGLHKISL GALVLALGLL VDDAIIAVEM MAVKMEQGYD
RLKAASFAWT STAFPMLTGT LITAAGFLPI ATAQSGTGEY TRSLFQVVTI ALVVSWFAAV
VFVPYLGAKL LPDLARLHAQ KHGGSADGYD PYATAFYQRF RRLVEWCVRY RKTVIVLTLA
AFVGALLLFR LVPQQFFPPS ARLELLLDIK LAEGASLRST GEEVQRLEKM LQGHDGIDNY
VAYVGTGSPR FYLPLDQQLP AASFAQVVVL AKDLESREAL RKWLIERMNE DFPHLRSRIS
RLENGPPVGY PVQFRVSGED IPQVRELARK VADRMRENPH VVNVHLDWEE PSKVVYLSID
QERARALGVS TASLSQFLQS ALTGSHVSFF REDNELIEIL LRGTEQERRD LSLLPSLAVP
TENGRSVALS QIATLEYGFE EGIIWHRNRL PTVTVRADIY DDSLPATLVA QIAPTLEPIR
AELPDGYLLE VGGTVEDAAK GQSSVNAGVP LFIVVVLSLL MVQLRSFSRM AMVFLTAPLG
LIGVTLFLLL FRQPFGFVAM LGTIALAGMI MRNSVILVDQ IEQDISHGLD RWHAIIEATV
RRFRPIVLTA LAAVLAMIPL SRSVFFGPMA VAIMGGLIVA TVLTLLFLPA LYAAWFRVKK
DEARA
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