| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_15180 |
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| Symbol | |
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| ID | 4384547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 1285902 |
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| End bp | 1287182 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639323764 |
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| Product | putative transporter |
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| Protein accession | YP_789352 |
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| Protein GI | 116051806 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.373658 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.00000309479 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATGGCCA TCGCCATGAT CGCGGCCTTC GTGGTCAACC TCCTGCTCGG CCTGCCGCTG
TTCCTCTGCC TGCTGCTCAC CGCGCTGGTG GGGTTCCTCT TCGTCGACCC GGCGCTGTTC
GCCAACACCC TGCCGCAGCG CTTCTTCGGC GGCATGGACA TCTTCTCGCT GATGGCGATC
CCGCTGTTCG TGCTGGCCGG CAACCTGATG AACCATTCCG GCATGACCCC GCGCCTGATG
CGCCTGGCCA ACGCCCTGGT CGGCCACTTC CGCGGCGGCC TCGGCCACGT CAACGTGGTC
GCCGGGGTGT TCTTCGCCGG GGTCAACGGG TCCGCCGCGG CCGACGCTTC GGCACTCAGC
ACCCTGCTGG TGCCGGCCAT GGAAAAGGAA GGCTACTCGC GGCGCTTCGC CGCCGGGCTG
ACCGCGGGCA GCTCGCTGAT CGGTCCGATC ATCCCGCCGA GCATCTTCAT GATCCTCTAC
TCCTCGCTGA CCAACACCTC GGTGGGCGAG CTGTTCCTCG CCGGGGTGAT TCCCGGCCTG
CTGCTGGCCG CCGCCTTCAT GCTGCTGAAC GCGGTGTACG CCTACCGCAA CGGGCTGCAG
GCGCGCCATG CGGCACCGGC CTGGGGCGAG ATCCTGGCGG CACTGTCCGG CGCCCTGACC
GCGCTGATCG CGCCGGTGAT CATCGTCGCC GGAATCGTCC TGGGCCTGGT CACGCCCACC
GAGTCGGGCG CCCTGATCGC CCTCTACGTG GCGCTGGTCG GCCTGCTCCA GCGCCAACTG
AGCCTGGTCG GGCTGTGGAA CTCGCTGCGC GAGACGGTAC GCCTGACCGC CAGCATCTAC
GTGATCATCG CCGCCGCCTC GGTGGTCAAC TGGTTGCTCA ACTACGCCCA GGTCGCCAGC
GAGTTCGCCC AGTTGCTGGA GCCGTTCGGC CACTCGCCGA CCCTGATGCT GTTCATCATC
AGTGCGGTGA TCTTCGTCTG CGGCATGCTC ATGGAGGAGG TCTCGGTACT GATGCTGCTG
ACACCGATAG TCGCTCCGGT GGCGCTGGCC GCCGGCGTGG ATCCGGTGCA CCTGGGGCTG
ATCTTCACCC TGAACATCAC CATCGCCCTG ATCACCCCAC CAATGGGCGC CTGCCTGTTC
ATCGTGGCGA CCATCAGCCG CCTCGATATC CTGGAAATGT TCAAGGGTAT CTGGCCGTTC
ATCCTGCTGG CCCTGGGGGT ACTCTCGCTG CTGATCCTGT TCCCCTCCCT GACCCTGTGG
CTGCCACGCC TGCTCAATTG A
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| Protein sequence | MMAIAMIAAF VVNLLLGLPL FLCLLLTALV GFLFVDPALF ANTLPQRFFG GMDIFSLMAI
PLFVLAGNLM NHSGMTPRLM RLANALVGHF RGGLGHVNVV AGVFFAGVNG SAAADASALS
TLLVPAMEKE GYSRRFAAGL TAGSSLIGPI IPPSIFMILY SSLTNTSVGE LFLAGVIPGL
LLAAAFMLLN AVYAYRNGLQ ARHAAPAWGE ILAALSGALT ALIAPVIIVA GIVLGLVTPT
ESGALIALYV ALVGLLQRQL SLVGLWNSLR ETVRLTASIY VIIAAASVVN WLLNYAQVAS
EFAQLLEPFG HSPTLMLFII SAVIFVCGML MEEVSVLMLL TPIVAPVALA AGVDPVHLGL
IFTLNITIAL ITPPMGACLF IVATISRLDI LEMFKGIWPF ILLALGVLSL LILFPSLTLW
LPRLLN
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