Gene PA14_13890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_13890 
Symbol 
ID4381910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp1193191 
End bp1194201 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content62% 
IMG OID639323666 
Productputative integrase protein 
Protein accessionYP_789255 
Protein GI116051902 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.216731 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.122609 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTTCA GCGTGGTGGA TGACCGCAGC GGTGTGGCCT ACCAGGAATA CCACTGCGTT 
TATGGTGAGG ATGCGGAGAC GGCACTTCGT TTTCTGTTCA ACTCGATGGC GCCGAAAGCG
GACCCGAGTT TTCCCTTTCA GGGCCGGCCC AAGCTGATCT ATCTGGACAA CGGTCCGGTG
GCCAAGCGTC GCGTTTTCCA GAGCGTCATG CGGGCGCTGG GCATCGAGTG GCAGACACAC
ATCCCTGCCA GCAAGGATGG AACGCGCACC ACGGCCCGCT CGAAAGGCAA GGTCGAACGT
CCTTTCCGCA CAGTGAAGGA AGCCCACGAG ACCCTGTACC ACTTCCACAA GCCGGAAACC
GAAGCCCAGG CCAACGAGTG GCTGTTGCGC TACCTAGTGC GCACCTACAA CCAGCAGACA
CATCGTGCCG AACCCCTTTC ACGGATCGAG GACTGGATCA CCCATGTGCC AACAGAGGGG
ATCCGTGAAA TGTGCTCATG GGATCAGTTC TGCCGCTTTG CTCGGGAGCC CGAGCGGCGC
AAAGTCGGGC CTGATGCCCG AATCACCACC GACGGTACCG CGTACGAGCT TGAGCCAGAG
ATGGCCGGCG ACTACGTCGT GCTGCTCTGG GGGCTGTTCG ACGATGAGCT GCATGCCGAG
TTCGATGGCG AGCGGTTCGG TCCTCACTAC CCGGTGTCCG GCCCCATTCC GCAGCACCGC
TACCGGGCTT TCAAGCGCAG CAAGGCAGAC GAGCGCTCGG CTCGTATCCG ATCTCTCGCG
GACCAGTTGG GGCTGCCGAT CGCGGCGCTT TCCGGGGAAG ATGTACGACT AGAGCCCGGT
TCTACTGACT CGACGCTCCC CATCCAGCCC TTCGTTTTCG AGCCCCAGGA ATCCCGCATT
GCGGCCAAGC CGGCTATCGC CGAGGAACTG GCAATGCCGC TGGCCAAGCT TTCAATGGAT
GACCGCGCCT TCATCGACCA GGTGCTGAGC GAGACCCTGG CTACGGACTG A
 
Protein sequence
MLFSVVDDRS GVAYQEYHCV YGEDAETALR FLFNSMAPKA DPSFPFQGRP KLIYLDNGPV 
AKRRVFQSVM RALGIEWQTH IPASKDGTRT TARSKGKVER PFRTVKEAHE TLYHFHKPET
EAQANEWLLR YLVRTYNQQT HRAEPLSRIE DWITHVPTEG IREMCSWDQF CRFAREPERR
KVGPDARITT DGTAYELEPE MAGDYVVLLW GLFDDELHAE FDGERFGPHY PVSGPIPQHR
YRAFKRSKAD ERSARIRSLA DQLGLPIAAL SGEDVRLEPG STDSTLPIQP FVFEPQESRI
AAKPAIAEEL AMPLAKLSMD DRAFIDQVLS ETLATD