Gene PA14_11250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_11250 
Symbol 
ID4382058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp978924 
End bp979808 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content68% 
IMG OID639323462 
Producthypothetical protein 
Protein accessionYP_789051 
Protein GI116052105 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1091] dTDP-4-dehydrorhamnose reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones76 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAATGC GCCTGATGCT TTTGGGCGGC GGTAATGCCC TTGGACAGGC GCTGATCCGC 
CTAGGGGCGG AGGAAGACAT CGGTTTCCTC GCGCCCAGAC CACCCGAGCA GGGCTGGGAT
GCCGCCAGCC TCACCACCCT GCTGGACGAA ACGCGCCCCG ACGCGGTGAT CAACCTCGCC
TTCTACCACG ACTGGTTCCA GGCCGAGCAG GTCGAGGCGG AGCGCCTGGG CGCCCAGGAG
CGCGCCGTCG AGCGCCTCGC GGAACTCTGC CAGCACTACG AGATCCTGCT GGTCCAGCCG
TCCAGCTACC GGGTCTTCGA CGGCGCCCGC GCCACCGCCT ACAGCGAGAA GGACGAGACC
CTTCCGCTGG GCCTGCGTGG CCAGGCGCTC TGGCGCATGG AGCAGAGCGT GCGCGCGGCC
TGCCCGCGAC ATGTGCTGAT CCGCTTCGGC TGGCTGCTGG ACGAAAGCCC GAACGGCTTG
CTGGGACGTT TCCTCAGCCG CGCCGAACAA CCGCAGCCGC TGTTCCTCGC CGACGACCGG
CGCGGCAACC CGACGCCGGT GGACGACGCC GCGCGGGTGG TGCTCTCTGT GCTCAAGCAG
CTCGACTGCC AGGCGCCGCT GTGGGGCACC TACCACTACG GCGGACTGGA AGCGACCACC
ACCCTGGCGC TGGGACAGGT GATCCTCAAC GAGGCGCGTA CCTATCGCTC CAACCTGATC
CAGGAGCCTT CGGCGGAGGC CCATGCCGCG CGCCCGGACG CGCTCGACGA GCCGCAGCAC
GCGGTGATGG TCTGCAAGAA GATCCTCCAC ACCTTCGGCA TCAAGCCGCG CGCCTGGCGC
GCAGGTTTGC CGGCTCTATT GGACAGGTAC TACAGGCATG TTTGA
 
Protein sequence
MRMRLMLLGG GNALGQALIR LGAEEDIGFL APRPPEQGWD AASLTTLLDE TRPDAVINLA 
FYHDWFQAEQ VEAERLGAQE RAVERLAELC QHYEILLVQP SSYRVFDGAR ATAYSEKDET
LPLGLRGQAL WRMEQSVRAA CPRHVLIRFG WLLDESPNGL LGRFLSRAEQ PQPLFLADDR
RGNPTPVDDA ARVVLSVLKQ LDCQAPLWGT YHYGGLEATT TLALGQVILN EARTYRSNLI
QEPSAEAHAA RPDALDEPQH AVMVCKKILH TFGIKPRAWR AGLPALLDRY YRHV