Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_11250 |
Symbol | |
ID | 4382058 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 978924 |
End bp | 979808 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639323462 |
Product | hypothetical protein |
Protein accession | YP_789051 |
Protein GI | 116052105 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 76 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGAATGC GCCTGATGCT TTTGGGCGGC GGTAATGCCC TTGGACAGGC GCTGATCCGC CTAGGGGCGG AGGAAGACAT CGGTTTCCTC GCGCCCAGAC CACCCGAGCA GGGCTGGGAT GCCGCCAGCC TCACCACCCT GCTGGACGAA ACGCGCCCCG ACGCGGTGAT CAACCTCGCC TTCTACCACG ACTGGTTCCA GGCCGAGCAG GTCGAGGCGG AGCGCCTGGG CGCCCAGGAG CGCGCCGTCG AGCGCCTCGC GGAACTCTGC CAGCACTACG AGATCCTGCT GGTCCAGCCG TCCAGCTACC GGGTCTTCGA CGGCGCCCGC GCCACCGCCT ACAGCGAGAA GGACGAGACC CTTCCGCTGG GCCTGCGTGG CCAGGCGCTC TGGCGCATGG AGCAGAGCGT GCGCGCGGCC TGCCCGCGAC ATGTGCTGAT CCGCTTCGGC TGGCTGCTGG ACGAAAGCCC GAACGGCTTG CTGGGACGTT TCCTCAGCCG CGCCGAACAA CCGCAGCCGC TGTTCCTCGC CGACGACCGG CGCGGCAACC CGACGCCGGT GGACGACGCC GCGCGGGTGG TGCTCTCTGT GCTCAAGCAG CTCGACTGCC AGGCGCCGCT GTGGGGCACC TACCACTACG GCGGACTGGA AGCGACCACC ACCCTGGCGC TGGGACAGGT GATCCTCAAC GAGGCGCGTA CCTATCGCTC CAACCTGATC CAGGAGCCTT CGGCGGAGGC CCATGCCGCG CGCCCGGACG CGCTCGACGA GCCGCAGCAC GCGGTGATGG TCTGCAAGAA GATCCTCCAC ACCTTCGGCA TCAAGCCGCG CGCCTGGCGC GCAGGTTTGC CGGCTCTATT GGACAGGTAC TACAGGCATG TTTGA
|
Protein sequence | MRMRLMLLGG GNALGQALIR LGAEEDIGFL APRPPEQGWD AASLTTLLDE TRPDAVINLA FYHDWFQAEQ VEAERLGAQE RAVERLAELC QHYEILLVQP SSYRVFDGAR ATAYSEKDET LPLGLRGQAL WRMEQSVRAA CPRHVLIRFG WLLDESPNGL LGRFLSRAEQ PQPLFLADDR RGNPTPVDDA ARVVLSVLKQ LDCQAPLWGT YHYGGLEATT TLALGQVILN EARTYRSNLI QEPSAEAHAA RPDALDEPQH AVMVCKKILH TFGIKPRAWR AGLPALLDRY YRHV
|
| |