Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_10300 |
Symbol | |
ID | 4382155 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 888559 |
End bp | 889170 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639323385 |
Product | putative efflux protein |
Protein accession | YP_788974 |
Protein GI | 116052182 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.0350881 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCTAG CCCTGCTGCT CGCCATGGGC GCGTTCTCCC TGAGCCTGTC GATTTCCCCC GGTCCGGTGA ACCTGACCAT CGTCGCTTCC GGCGCCAACC ATGGTTTCCG CCGGACCCTG CCGTTCGTCA CCGGCGCCAC CCTCGGCTTC GTCCTGCTGC TGGCCTTCGT CGGCTTCTGG TTCGTCCGCG CGATCGAGGC CTACCCGCGC TTCTTCGACT ACCTGGGGAT GGCCGGCGCG GCGTTCATCG CTCATGTGGG CTACCGCATC GCCACCGCGG ATCCACGCCT GGCCCTGGAG GAAAACGGGG TCCCCGGGTT CTTCCAGGGC GTGCTCCTGC AATGGCTCAA TCCCAAGGCC TGGATCGCCT GCGCTTCCGG CGTGGCCTTG TTCGCCAGCC CGAGCACGCA CGCGCCGCTG CTGGTCTTCA TGGCCATCTA CCTGGTGGTC TGCTACCTCT CGCTGGCCGC CTGGGCGCTG CTCGGTGACC GCGTGGCGCT GCTGCTCGAC AGCCCCCGGC GGGTGCGCCT GTTCAATCGG GCGATGGGCG GCACCCTGGT GCTGACCGCC GGCTACATGC TCTACCTGCA GCTCGCCGCT AGCCCGGATT GA
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Protein sequence | MPLALLLAMG AFSLSLSISP GPVNLTIVAS GANHGFRRTL PFVTGATLGF VLLLAFVGFW FVRAIEAYPR FFDYLGMAGA AFIAHVGYRI ATADPRLALE ENGVPGFFQG VLLQWLNPKA WIACASGVAL FASPSTHAPL LVFMAIYLVV CYLSLAAWAL LGDRVALLLD SPRRVRLFNR AMGGTLVLTA GYMLYLQLAA SPD
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