| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_10260 |
|---|
| Symbol | |
|---|
| ID | 4382159 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 883311 |
|---|
| End bp | 884285 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639323381 |
|---|
| Product | putative dehydrogenase E1 component |
|---|
| Protein accession | YP_788970 |
|---|
| Protein GI | 116052186 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCACTC TGAGCACCGA CCAACTGCTC CATGCCTACC GCGTGATGCG CACCATCCGC
GCCTTCGAGG AACGCCTGCA CGTCGAGTTC GCCACGGGCG AGATACCCGG CTTCGTCCAC
CTCTACGCCG GCGAGGAAGC CTCCGCCGCC GGCGTGATGG CGCACCTGCG CAACGACGAC
TGCATCGCCT CCACCCATCG CGGCCACGGC CACTGCATCG CCAAGGGCGT AGACGTGCAC
GGCATGATGG CGGAGATCTA TGGCAAGAAG ACCGGGGTCT GCCAGGGCAA GGGCGGCTCC
ATGCATATCG CCGACCTGGA GAAAGGCATG CTCGGCGCCA ACGGAATCGT CGGCGCCGGC
GCGCCGCTGG CCGCCGGCGC CGCGCTGGCG GCCAAGCTGA AAGGCAGCGA TGCGGTGGCG
GTGGCCTTCT TCGGCGATGG CGGCTCCAAC GAAGGCGCGG TGTTCGAGGC GATGAACCTG
GCCGCGGTGT GGAACCTGCC GTGCCTGTTC GTCGCCGAGA ACAACGGCTA TGCCGAGGCC
ACCGCGGCCA ACTGGTCGGT GGCCTGCGAC CACATCGCCG ACCGCGCCGC CGGTTTCGGC
ATGCCCGGGG TGACCGTCGA CGGCTTCGAC TTCTTCGCCG TCCACGAGGC TGCCGGCGCC
GCCATCGAGC GCGCCCGCGC CGGCGAGGGG CCGTCGCTGA TCGAAGTCAA GCTGACCCGC
TACTACGGAC ACTTCGAGGG CGACGCACAG ACCTACCGCG ATCCCGACGA AGTAAAGCAC
TACCGGGAAA CCCGCGACTG CCTCAAGCAG TTCCGCGAAC GCACCTGCCA CGCCGGCCTG
CTCTCCGCCA GCGACCTGGA CGCCATCGAC GCCGAGGTCG AGGCGCGCAT CGAGGATGCC
GTGCAGCGCG CGAAGAACGA TCCCAAGCCG GAGCCGGACG ACCTGCTGCG CGACGTCTAC
GTGTCCTATC CCTGA
|
|---|
| Protein sequence | MSTLSTDQLL HAYRVMRTIR AFEERLHVEF ATGEIPGFVH LYAGEEASAA GVMAHLRNDD
CIASTHRGHG HCIAKGVDVH GMMAEIYGKK TGVCQGKGGS MHIADLEKGM LGANGIVGAG
APLAAGAALA AKLKGSDAVA VAFFGDGGSN EGAVFEAMNL AAVWNLPCLF VAENNGYAEA
TAANWSVACD HIADRAAGFG MPGVTVDGFD FFAVHEAAGA AIERARAGEG PSLIEVKLTR
YYGHFEGDAQ TYRDPDEVKH YRETRDCLKQ FRERTCHAGL LSASDLDAID AEVEARIEDA
VQRAKNDPKP EPDDLLRDVY VSYP
|
|---|
| |