Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_09320 |
Symbol | |
ID | 4385696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 798202 |
End bp | 799926 |
Gene Length | 1725 bp |
Protein Length | 574 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639323308 |
Product | putative ATP-binding component of ABC transporter |
Protein accession | YP_788897 |
Protein GI | 116052259 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.955623 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCTGT TCGAACGAAT GCGTGCGCTG CCCGAAGACT GCCGTGCCGC GTTGCGCCGG GCGAGCGCTT GGGCGGTCCT GGCGGCGCTG CTGGACGCCG CTTGCGGCGT ATTGCTGGTG CCGTTGGTCG AGGCCTGGTT CGCCGAAGGC GCGTTGCCCT GGCGCTGGGT CGCCGCGTTG CTCGGCTTGA GCCTGGCGCA GGCGCTGTTG CAGTACCTGG CCCTGCGTCG CGGTTTCGCC GCCGGCGGCT CGCTGGCGGC TGGACTGGTG CGCAGCCTGG TGGCGCGCTT GCCGCGCCTG GCGCCGCCGG CGCTGCGCCG GGTCGCGCCG GCCGAAGGCC TGCTGCGCGG CCCGGTGATG CAGGCGATGG GCATTCCGGC GCACCTGCTG GGGCCGCTGA TCGCCGCGAT GGTGACGCCG CTCGGGGTGA TCCTCGGGCT GTTCCTGATC GACCCGTCCA TCGCCCTCGG CCTGCTCGTC GCCGGTGCCG TCCTCGCCGC GCTGTTGCGC TGGAGCGGGC GGCGCAATCT GGCGGCGGAG GATGCCCGGC TGGCCGCCGA GCGCGACGCC GCACGGCAGT TGCAGGCGTT CGCCGAACGC CAGCCGCTGC TGCGCGCGGC GCAGCGCGAA AGCGTCGCCC GCCAGGGGCT GGAAGAGGCC TTGCGCAGTC TCCACCGCAG CACCCTGGAA CTGTTGCGGC GCAGCCTGCC CAGCGGCCTC GGCTTCGCCC TGGCGGTGCA GGCGGCGTTC GCCTTCGCCC TGCTCGGCGG CGCCTGGGCG GTGGAGCGGC AATGGCTGGA CGGCGCGCGG CTGGTGGCCG TGCTGGTGCT GCTGGTGCGC TTCATCGAGC CGCTGGCCCA GCTCACCCAT CTCGACCAGG CGTTGCGCGG CGCCTGGCAG GCGCTGGACA CCCTGCTGCG GGTTTTCGCC CTGGCTCCGC TGCACAGCCC CGAGCCGGGC GAGCGGCCGC ACGACGCCAG CCTGGCGGCC GAGGCCGTGG AATTGCGCCT GGAAGATGGC CGCGCCTTGC TCGAGGACAT TTCCCTGAGG CTGGAGCCGG GTTCGCTGAA CGTCCTCGTC GGACCCTCCG GGGCCGGCAA GAGCAGCCTG CTGGCGCTGC TCGGGCGGCT CTACGACGTC GATGCCGGGC GTGTCCTGCT GGGTGGCGTG GATATCCGCC GGTTGAGCGA AACGACCCTC GCCGCCAGTC GCAACCTGGT GTTCCAGGAC AACGGCCTGT TCCGCGGCAG CGTTGCCTGG AACCTGCGCA TGGCGCGAGC GGACGCCGAT CTCGAAGCGC TGCGCGAGGC GGCGCGGGCG GTTGGCCTGC TGGAAGAGAT CGAGGCCTGG CCGCAGGGCT GGGACAGCGA TGTCGGTCCC GGCGGCGCGC TGCTGTCCGG CGGCCAGCGG CAACGCCTGT GCCTGGCTCG CGGGCTGCTC TCGACGGCGC CGTTGCTGCT GCTCGACGAG CCCACCGCCA GCCTCGACGC CGCCAGCGAG GCGCAGGTGC TGCGCAGCCT GCTCGGGTTG CGCGGCCGGC GCACCCTGCT GGTAGTGACC CACCGCCCGG CGCTGGCGCG TCAGGCCGAC CAGGTACTGC TGCTGGAGGA GGGGCGCCTG TGCCTCAGCG GACGTCACGC CGATCTGCTC GTCCGGGACG ACTGGTATGC CGGTTTCGTC GGGCTGGCGG GCGAGGAAAG TTCCGCGACG GTCGTGGATC GATAG
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Protein sequence | MTLFERMRAL PEDCRAALRR ASAWAVLAAL LDAACGVLLV PLVEAWFAEG ALPWRWVAAL LGLSLAQALL QYLALRRGFA AGGSLAAGLV RSLVARLPRL APPALRRVAP AEGLLRGPVM QAMGIPAHLL GPLIAAMVTP LGVILGLFLI DPSIALGLLV AGAVLAALLR WSGRRNLAAE DARLAAERDA ARQLQAFAER QPLLRAAQRE SVARQGLEEA LRSLHRSTLE LLRRSLPSGL GFALAVQAAF AFALLGGAWA VERQWLDGAR LVAVLVLLVR FIEPLAQLTH LDQALRGAWQ ALDTLLRVFA LAPLHSPEPG ERPHDASLAA EAVELRLEDG RALLEDISLR LEPGSLNVLV GPSGAGKSSL LALLGRLYDV DAGRVLLGGV DIRRLSETTL AASRNLVFQD NGLFRGSVAW NLRMARADAD LEALREAARA VGLLEEIEAW PQGWDSDVGP GGALLSGGQR QRLCLARGLL STAPLLLLDE PTASLDAASE AQVLRSLLGL RGRRTLLVVT HRPALARQAD QVLLLEEGRL CLSGRHADLL VRDDWYAGFV GLAGEESSAT VVDR
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