Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_08730 |
Symbol | rplA |
ID | 4384607 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 744140 |
End bp | 744835 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639323257 |
Product | 50S ribosomal protein L1 |
Protein accession | YP_788846 |
Protein GI | 116052308 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0081] Ribosomal protein L1 |
TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.000385028 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCTAAGC TGACCAAGCG CCAGAAGGCG ATTGCCGAGA AAGTAGTTGC CGGCAAGCAG TACAGCTTCG AAGAGGCCGC CAAGCTGCTG GCCGAGCTGT CCACCATCAA GTTCAAGGAG TCCGTGGACG TTGCCGTGAA CCTCGGCGTC GATCCGCGTA AATCCGACCA GGTCGTTCGT GGCGCCACCG TCCTGCCGAA CGGCACCGGC AAGAGCGTCC GCGTTGCCGT CTTCACCCAG GGTCCGGCTG CCGAAGCCGC TCTGGCTGCC GGCGCCGACA AGGTGGGTAT GGACGAGCTG GCTGCCGAAA TGAAAGGCGG CGACCTGAAC TACGACGTCG TCATCGCTTC CCCGGATGCC ATGCGTGTCG TCGGTCAGCT GGGCCAGATC CTCGGCCCGC GTGGTCTGAT GCCGAACCCG AAAGTCGGCA CCGTGACTCC GGACGTCGCT ACCGCCGTGA AGAATGCCAA GGCTGGTCAG GTACGTTTCC GTACCGACAA GAACGGCATC ATCCACAGCT CCGTCGGTAA GGTCGATTTC GAACCGGCCA AGCTGCAGCA GAACGTTGAA GCACTGCTGG CTGACCTGAA GCGCCTGAAG CCGTCCTCGT CGAAAGGCGT GTACGTCAAG CGCGTGACCC TGAGCACCAC CATGGGTCCG GGCCTGCAGA TCGACCTGGC TTCCCTGGAA GCCTAA
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Protein sequence | MAKLTKRQKA IAEKVVAGKQ YSFEEAAKLL AELSTIKFKE SVDVAVNLGV DPRKSDQVVR GATVLPNGTG KSVRVAVFTQ GPAAEAALAA GADKVGMDEL AAEMKGGDLN YDVVIASPDA MRVVGQLGQI LGPRGLMPNP KVGTVTPDVA TAVKNAKAGQ VRFRTDKNGI IHSSVGKVDF EPAKLQQNVE ALLADLKRLK PSSSKGVYVK RVTLSTTMGP GLQIDLASLE A
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