Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_08695 |
Symbol | secE |
ID | 4384187 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 742681 |
End bp | 743049 |
Gene Length | 369 bp |
Protein Length | 122 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639323254 |
Product | preprotein translocase subunit SecE |
Protein accession | YP_788843 |
Protein GI | 116054414 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0690] Preprotein translocase subunit SecE |
TIGRFAM ID | [TIGR00964] preprotein translocase, SecE subunit, bacterial |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000000000080106 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.00194184 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAATGCCA AGGCAGAAGC CAAAGAATCA CGTTTTGATC TCTTGAAATG GCTCTTGGTT GCCGTTCTGG TTGTGGTTGC CGTTGTGGGC AATCAGTACT TTTCGGCTCA ACCAATCCTG TATCGCGTTC TCGGTATTCT CGTTCTGGCG GTGATCGCTG CTTTCCTGGC TCTGCAAACG GCCAAGGGGC AGGCCTTCTT TAGTCTTGCT AAGGAAGCGC GCGTCGAGAT TCGCAAGGTC GTATGGCCGA GTCGTCAAGA AACAACTCAG ACCACGCTGA TCGTGGTCGC GGTAGTGCTG GTAATGGCGC TGCTGCTGTG GGGGCTCGAT TCCCTGCTGG GTTGGTTGGT TTCCATGATT GTAGGTTAA
|
Protein sequence | MNAKAEAKES RFDLLKWLLV AVLVVVAVVG NQYFSAQPIL YRVLGILVLA VIAAFLALQT AKGQAFFSLA KEARVEIRKV VWPSRQETTQ TTLIVVAVVL VMALLLWGLD SLLGWLVSMI VG
|
| |