Gene PA14_08260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_08260 
Symbol 
ID4383967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp705588 
End bp706283 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content69% 
IMG OID639323214 
Productputative minor tail protein L 
Protein accessionYP_788812 
Protein GI116054367 
COG category[S] Function unknown 
COG ID[COG4672] Phage-related protein 
TIGRFAM ID[TIGR01600] lambda-like phage minor tail protein L 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0000281047 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCATCA CAGCCGATGA CCAGGCCCTC GAGCCTGGGG CGCTGGTGCG CCTGTTCGAC 
CTGGATTGCA CCGGGTTCGG CGGCGAGATG CTGCGCTTCC ACGGCCACCT GCAGCAGGGG
CCGATCCACT GGCAGGGCAA CGCCTACCAA GCTTGGCCGC TGGAGGCGCG CGGCTTCGAG
CAGCGCGGCG ACGGCCGGGC CAGTTCGCCG ACCCTTAGCG TGGGCAACAT CGACGGCAGC
ATCAGCGCGC TCTGCCTGTT CTTCGATGGC CTGGTAGGCG CGCGCCTGAC CGTGCGCGAG
ACCTATGCGC ACTACCTGGA TGCGGCCAAC TTCGCCGAAG GCAACCCGCA GGCCGACCCC
TCCCAGGAGC GCCTGAACAT CTGGTTCCTC GAGCAGAAGA CCGCCGAGAA CAGCGTCCAG
GTGACCTGGG AGCTGTCCGC TCCGCCGGAT TTCCAGGGCC AGCAGATCCC GGCGCGCCAG
ATCACCTCGC TGTGCCACTG GTGCATCACC AACGAGTACC GCGGGCAGGA CTGCAACTAC
ACCGGCACGG CGATGTTCGA TGCCGACGGC AATCCGGTGG ACGATCCGGC GCTGGACCGC
TGCGGCGGCC GGGTCAGCGA TTGCAAGCTG CGCTTCGGCG CGGACAACCC GCTGTCCCAC
GGCGGCTTCG CCGGCGCCGG CCTGGTCAGG ATGTGA
 
Protein sequence
MTITADDQAL EPGALVRLFD LDCTGFGGEM LRFHGHLQQG PIHWQGNAYQ AWPLEARGFE 
QRGDGRASSP TLSVGNIDGS ISALCLFFDG LVGARLTVRE TYAHYLDAAN FAEGNPQADP
SQERLNIWFL EQKTAENSVQ VTWELSAPPD FQGQQIPARQ ITSLCHWCIT NEYRGQDCNY
TGTAMFDADG NPVDDPALDR CGGRVSDCKL RFGADNPLSH GGFAGAGLVR M