| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_08010 |
|---|
| Symbol | |
|---|
| ID | 4385492 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 689063 |
|---|
| End bp | 689620 |
|---|
| Gene Length | 558 bp |
|---|
| Protein Length | 185 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639323191 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_788789 |
|---|
| Protein GI | 116054344 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4540] Phage P2 baseplate assembly protein gpV |
|---|
| TIGRFAM ID | [TIGR01644] phage baseplate assembly protein V |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0000000000196385 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.000218842 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTATG TCAGTGCGGA GCATGACCGC ATGCTCGCCG CGATGATCCT GCCCTGCGTG
GTGGTCGCCG TGGACCTGGC AGCGGCGCGG GTACGGGTGC GCTCCGGCGA CTGGACCAGC
GGCTGGCTGC GCTGGCACTC CCTGGCAGCC GGCAAGGTTC GCCACTGGCG TGCGCCGAGC
ATAGGCGAAC AGGGGGTACT GCTCAGTCCG TCGGGCGGAG TGTCAATGGG TACCTTTATT
CCCGGTTTGT ACGGCGATGC GGGCACGGCG CCGGACAACA GCGCCAGCAG TGAGACCTGG
CGTTTCGACG ACGGCGCCTC GTTGAGTTAC GACTGGGCTG CGCATCGCTA CCGCGTCGAG
CTGCCCAGCG GCACCGTGGA AGTGAGGGTC GGCGCCAGCG AGGTGCGGGT CAGCGACGGG
GCGGTCAGTC TCAAGGCGCC GAAGATCAGC CTGGAAGGAC CGGTGGAGAT CGCCGGGACA
CTGACGGTCA GCGGAGACAT CCTCGGCGGC GGCTCGATCA TCGACACCGC CGGCAACAGC
AACCACCACA CCCATTGA
|
|---|
| Protein sequence | MSYVSAEHDR MLAAMILPCV VVAVDLAAAR VRVRSGDWTS GWLRWHSLAA GKVRHWRAPS
IGEQGVLLSP SGGVSMGTFI PGLYGDAGTA PDNSASSETW RFDDGASLSY DWAAHRYRVE
LPSGTVEVRV GASEVRVSDG AVSLKAPKIS LEGPVEIAGT LTVSGDILGG GSIIDTAGNS
NHHTH
|
|---|
| |