Gene PA14_03550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_03550 
Symbol 
ID4383678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp322033 
End bp323247 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content73% 
IMG OID639322842 
Productputative MFS transporter 
Protein accessionYP_788442 
Protein GI116054000 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2807] Cyanate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0168326 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00000000000715422 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCCACTG CCAACCCACC CGGCCGCACC CTCTGGCTGA TGGCCGCCAT CGTCCTGGTC 
GGCCTCAACC TGCGGCCCTC CATGGCCGCC GTCGGCCCAC TGCTGAACGC CATGCGCGGC
GAGATCGCGC TCAGCTTCGG CGACGTCTCG CTGCTGACCG CCCTGCCGGT GCTGACCCTC
GGCCTCGGCA TGTTCTTCGG TCTGAGCATC GCCCGCCGCG TCGGCGAGTG GCGTTCGGTG
GCCCTCGCCC TGCTGCTGAT CGGCGCCGCC AGCGCCCTGC GCCTGGGCAG CCGAGGCCTG
CCCGACCTGC TCGGCAGCGC CATGCTCGCC GGCCTCGGCA TCGCCCTGAT CCAGGCGCTG
ATGCCGGCCC TGATCAAGGC CCGTTTCGGC GCGCGCACGC CGCTCTGCAT GGGGCTCTAC
GTCACCGCCA TCATGGCTGG CGCGGCGCTG TCCGCCAGCG CTGCGCCGAC CCTGGCGGAG
CACGCCGGCT GGCGGCTCGG CCTCGGTGCC TGGGCGGCGC TCGCCGCGCT CGCGCTGCTG
GCCTGGTGGC TGCAACCCGG CACCCGCCTG CGCCTGCCCG ACGCGCAGCC GGGCAGGAGC
CTCCTGCGCT ATCCGCGGAC CTGGCTGCTG ATCCTGTTCT TCGGCCTCGG CACGGCCTGC
TACACCTGCG TGCTGGCCTG GCTCGCGCCC TATTACCTGG AACAGGGCTG GAGCGCCCAG
GAATCCGGGC TGCTGCTCGG TTTCCTGACG GCCGTGGAGG TACTCTCCGG GTTGCTCGCG
CCGGCCCTGG CCAGCCGCTC GCGGGATCGC CGCCCGGTGC TGGTCGGGCT AACCGCGCTG
ATGCTGGCCG GCTTCCTCGG CCTCGCCTGG GCGCCGGCCA GCCTGCCGCT GCTCTGGGCG
CTGTGCCTCG GACTGGGCAT CGGCGGGCTG TTCCCCATGG GCTTGATCGT CTGTCTCGAC
CACTTCGACG CGCCGCAACG CGCCGGTCAA CTGGCTGCCC TGGTACAAGG CGCCGGCTAC
CTGATCGCCG GGGTCTCGCC ATGGATCGCC GGGCTGCTGC GCGACAGCCT CGGCAGCTTC
ACCGGCGCCT GGCTCGGGCT GACCACGGTG GCGGCGCTGC TACTGGGGCT GGGCCTGCGC
TTCGACCCGC GGCGCTATGC GGCACTGTTC GCCGAGCGAC AGCCGCAAGG CGTCGGCGCC
GAAAGCTTGC GCTGA
 
Protein sequence
MPTANPPGRT LWLMAAIVLV GLNLRPSMAA VGPLLNAMRG EIALSFGDVS LLTALPVLTL 
GLGMFFGLSI ARRVGEWRSV ALALLLIGAA SALRLGSRGL PDLLGSAMLA GLGIALIQAL
MPALIKARFG ARTPLCMGLY VTAIMAGAAL SASAAPTLAE HAGWRLGLGA WAALAALALL
AWWLQPGTRL RLPDAQPGRS LLRYPRTWLL ILFFGLGTAC YTCVLAWLAP YYLEQGWSAQ
ESGLLLGFLT AVEVLSGLLA PALASRSRDR RPVLVGLTAL MLAGFLGLAW APASLPLLWA
LCLGLGIGGL FPMGLIVCLD HFDAPQRAGQ LAALVQGAGY LIAGVSPWIA GLLRDSLGSF
TGAWLGLTTV AALLLGLGLR FDPRRYAALF AERQPQGVGA ESLR