Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_03530 |
Symbol | |
ID | 4383677 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 321051 |
End bp | 321983 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639322841 |
Product | transcriptional regulator |
Protein accession | YP_788441 |
Protein GI | 116053999 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.0369459 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0000000000000400126 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCTGATCG CCAACGGCCT GCGCAAGGTC GACATGCAGG ACCTGCTGGT CTTCCTCCAG GTCCACCAAC GACAGAACCT CGTCGAGGTC GCCGAACAGC TGAACCTCAG TCCGTCGACG GTCAGCTACT GCCTGAAGAA GCTGCGCCAG GCCTTCGACG ACGAGCTGTT CATCGCCACC CGCGGCGGCA TGCAGCCGAC CCACAAGAGT CGCGCCATGC TGCCCCATGT GGAGGAAATG CTCGCCCGCA TCAACGCCTG TCACGCCGCC CAGGGCAGCT TCGACCCGCG TGGCGAGCCG CGTACCTTTA CCCTCTGCGC GCCGGAATAC GTCGAGCTGC TGATCCTTCC GGCACTCCTG CGACGGCTCG CCGCCAACGG CCCGAGGATC GGCCTGGACA TCCGCCGCCT GGGTCCCGAA CTGCCCACCG AAGCATTGCT CGACGGCCAG GTCGACCTGG TCTTCGACTT CGGTCCCGAG TACCACCGAC CGGCACCGGA GCTACAGGCG CTCGCCCTGT TCAGCGACGA ACTGCTCTGC GTGCAGGATC GTGCCCAGCC GCGCCACGAG CGCCTGGAAC TGGACGAGTT CTGCCGGCGC CGCTTCGTCT TCCCGACCCC GCTCGACGCC AGCAACGCCA ACCTGGTGGA CACGTGGCTG CGACGCCAGG GCCGCAGCCG CGAAGTCGCC GCGCGCGCCA ACAGCTACGT CGCCGCCCTG CAACTGCTGT CGGGCAGCGA CTTCGTGCTG ATGCTGCCGC GACGTATCCA CGCGCTGCTC GACGATGGCC GCCATCGCGC CTGCCTCGCA CCGTCAGGGC TGCCGCCGTT CGCCCTGCAC CTGTCATGGA GCCGCGCCGC CGACCAGGAC CCGGCGAACC TCTGGCTGCG CGAACAGGTG CTGATCGTCT GCGCCGAGCT GGGTTTGCTC TAG
|
Protein sequence | MLIANGLRKV DMQDLLVFLQ VHQRQNLVEV AEQLNLSPST VSYCLKKLRQ AFDDELFIAT RGGMQPTHKS RAMLPHVEEM LARINACHAA QGSFDPRGEP RTFTLCAPEY VELLILPALL RRLAANGPRI GLDIRRLGPE LPTEALLDGQ VDLVFDFGPE YHRPAPELQA LALFSDELLC VQDRAQPRHE RLELDEFCRR RFVFPTPLDA SNANLVDTWL RRQGRSREVA ARANSYVAAL QLLSGSDFVL MLPRRIHALL DDGRHRACLA PSGLPPFALH LSWSRAADQD PANLWLREQV LIVCAELGLL
|
| |