Gene PA14_02090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_02090 
Symbol 
ID4383567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp190557 
End bp191222 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content68% 
IMG OID639322724 
ProductTetR family transcriptional regulator 
Protein accessionYP_788325 
Protein GI116053888 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.395705 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTGA CAGTGCCCGC CCACGACCCG GCCGCCCGCG ACAAGCCGGC CGGGCGCATC 
CGCCAGAAGA ACGAGGAGGC GATCCTCGCC GCGGCCGAGG AGGAGTTCGC CCGCCACGGC
TTCAAGGGCA CCAGCATGAA CACCATCGCG CAGAACGTTG GCCTGCCCAA GGCCAACCTG
CACTACTACT TCGGCAACAA GCTGGGCCTC TACACGGCGG TGCTGAGCAA CATCCTCGAA
CTCTGGGACA GTACCTTCAA CACCCTCTGC GTCGACGACG ATCCGGCCGA GGCGCTGGCC
CGCTACATCC GCGCCAAGAT GGAGTTCTCC CGCCGCTACC CGCTGGCCTC GCGGATCTTC
GCCATGGAGA TCATCAGCGG CGGCGAGTGC CTCACCGCGC ATTTCAACCA GGACTACCGC
AGCTGGTTCC GCGGCCGCGC CGCGGTATTC GAGGCCTGGA TCGCCGCCGG CCGGATGGAC
CCGGTGGATC CCGTGCACCT GATCTTCCTG CTCTGGGGCA GCACCCAGCA CTACGCCGAC
TTCGCCAGCC AGATCGGCTT GGTCACCGGC CGCAAGCGCA TGTCCAGGCA GGACTTCGCC
GCCGCCGCCG ACAACCTGGT GCGGATCATC CTCAAGGGCT GCGGACTGAC CCCGCCGGCG
GCCTGA
 
Protein sequence
MTLTVPAHDP AARDKPAGRI RQKNEEAILA AAEEEFARHG FKGTSMNTIA QNVGLPKANL 
HYYFGNKLGL YTAVLSNILE LWDSTFNTLC VDDDPAEALA RYIRAKMEFS RRYPLASRIF
AMEIISGGEC LTAHFNQDYR SWFRGRAAVF EAWIAAGRMD PVDPVHLIFL LWGSTQHYAD
FASQIGLVTG RKRMSRQDFA AAADNLVRII LKGCGLTPPA A