| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_01970 |
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| Symbol | |
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| ID | 4383558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 178382 |
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| End bp | 181429 |
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| Gene Length | 3048 bp |
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| Protein Length | 1015 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639322715 |
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| Product | putative RND efflux transporter |
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| Protein accession | YP_788316 |
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| Protein GI | 116053879 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.335832 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGGCG GTTTCAACCT GTCGGACTGG GCCCTGCGCC ACCAGTCCCT GGTCTGGTAC
CTGATGGCGG TATCGCTGGT GATGGGCGTG TTCTCCTACC TCAACCTGGG GCGCGAGGAG
GATCCCTCGT TCGCCATCAA GACCATGGTC ATCCAGACCC GCTGGCCGGG CGCCACGGTG
GACGACACCC TGGAGCAGGT CACCGACCGC ATCGAGAAGA AGCTCGAGGA GCTGGACTCG
CTGGATTACG TGAAGAGCTA CACGCGACCC GGCGAATCGA CGGTCTTCGT CTACCTCAAG
GACACCACCA AGGCCGGCGA CATCCCGGAT ATCTGGTACC AGGTGCGCAA GAAGATCTCC
GACATCCAGG GCGAATTCCC CCAAGGCATC CAGGGACCGG GTTTCAACGA CGAGTTCGGC
GACGTGTTCG GCAGCGTCTA CGCCTTCACC GCCGACGGCC TGGACTTCCG CCAGCTGCGC
GACTACGTGG AGAAGGTGCG CCTGGACATC CGCTCGGTGA AAGACCTGGG CAAGGTGCAG
ATGATCGGTG CGCAGAACGA GGTCATCTAC CTCAACTTCT CCACCCGCAA GCTGGCCGCC
CTCGGTCTCG ACCAGCGCCA GGTCGTGCAG AGCCTGCAAG CGCAGAACGC GGTGACCCCG
TCCGGCGTGG TCGAGGCCGG CCCCGAGCGC ATCTCGGTGC GCACCTCCGG CAACTTCCGT
TCGGAAAAGG ACCTGCAGGC GGTCAACCTG CGGGTCAACG ATCGTTTCTA CCGGCTGTCC
GACCTAGCCA GCATCAGCCG CGATTTCGTC GACCCGCCGA CCTCGCTGTT CCGCTACAAG
GGCGAGCCGG CCATCGGCCT GGCGGTGGCG ATGAAGGAGG GCGGCAATAT CCTCGAGTTC
GGCGAGGCGC TCAATGCGCG CATGCAGGAG ATCACCGGCG AACTGCCGGT CGGGGTCGGC
GTGCACCAGG TGTCGAACCA GGCCCAGGTG GTGAAGAAGG CGGTCGGCGG TTTCACCCAG
GCGCTGTTCG AGGCGGTGGT GATCGTCCTC ATCGTCAGCT TCGTCAGCCT CGGCCTGCGC
GCCGGGCTGG TGGTGGCCTG CTCGATCCCG CTGGTGCTGG CGATGGTCTT CGTGTTCATG
GAATACACCG ACATCACCAT GCAGCGGGTT TCCCTCGGCG CGCTGATCAT CGCCCTCGGC
CTGCTGGTGG ACGATGCCAT GATCACCGTG GAGATGATGA TCACGCGCCT CGAACTGGGC
GACTCGCTGC ACGACTCGGC GACCTACGCC TACACCTCGA CGGCCTTCCC GATGCTCACC
GGGACCCTGG TGACGGTGGC CGGCTTCGTG CCCATCGGGC TCAACGCCAG CTCCGCCGGC
GAGTACACCT TCACCCTGTT CGCGGTGATC GCCGTGGCCC TGCTGCTGTC GTGGATCGTC
GCGGTGCTGT TCGCCCCGGT GATCGCCGTG CACATCCTGC CGAAGACTCT CAAGCACAAG
TCGGAGCAGA AGAAGGGGCG CATCGCCGAG CGTTTCGACA GCCTGCTGCA CCTGGCGATG
CGCCGGCGCT GGACGACCAT CTTCCTCACC GCGCTGCTGT TCGGCGTGTC GCTGTTCCTG
ATGAAGTTCG TCCAGCACCA GTTCTTCCCG TCTTCCGACC GTCCGGAACT GCTGGTCGAC
CTCAACCTGC CGCAAAACAG CAGTATCCAC GAGACCAGGG CGGTGATGGA CCGCCTGGAA
GCGACGCTGA AGGACGACGA GGACATCGAC CACTGGAGCG CCTACGTCGG CGAAGGCGCG
ATCCGCTTCT ACCTGCCGCT GGACCAGCAG TTGCAGAACA ACTTCTATGG CCAACTGGTG
ATCGTCACCA AGGACTTGGA GGCCCGCGAG CGCGTCGCCG CGCGCCTGCG CGATCGCTTG
CGCAAGGACT ATGTCGGCAT CAGCACCTAC GTGCAGCCGC TGGAGATGGG GCCGCCGGTG
GGACGGCCGA TCCAGTACCG GGTCAGCGGA CCGCAGATCG ACAAGGTCCG CGAGTACGCC
ATGGGCCTGG CCGGCGTGCT CGACGGCAAC CCGAACATCG GCGATATCGT CTACGACTGG
AACGAGCCCG GGAAGATGCT CAAGATCGAC ATCGCCCAGG ACAAGGCGCG CCAGCTCGGG
CTGTCCTCCG AGGACGTGGC GCAGATCATG AACAGCGTGG TGACCGGCAG CGCGGTGACC
CAGGTGCGCG ACGACATCTA CCTGGTGAAC GTCATCGGCC GCGCCGAGGA TAGCGAGCGC
GGCTCGCTGG AGACCCTGGA GAGCCTGCAG ATCGTCACGC CCAGCGGCAC CTCGATCCCG
CTCAAGGCGT TCGCCAAGGT CAGCTACGAG CTGGAGCAGC CGCTGGTGTG GCGCCGCGAC
CGCAAGCCGA CGATCACGGT GAAGGCGTCG CTGCGCGGCG AGATCCAGCC CACCGACCTG
GTCGCCAAGC TGGCGCCGGA GGTCAAGCGC TTCGCCGACG GCCTGCCGGC GAACTACCGG
ATCGAAGTGG GCGGTACGGT GGAGGAGAGC GGCAAGGCCG AGGGCCCGAT CGCCAAGGTG
GTGCCGCTGA TGCTGTTCCT CATGGCGACC TTCCTGATGA TCCAGTTGCA GAGCGTGCAG
AAGCTGTTCC TGGTGGCCAG CGTCGCGCCG CTGGGGCTGA TCGGCGTGGT CGCGGCGTTG
CTGCCGACCG GCACGCCGAT GGGCTTCGTG GCGATCCTCG GGATTCTCGC GCTGATCGGC
ATCATCATCC GCAACTCGGT GATCCTGGTG ACCCAGATCG ATGCCTTCGA GAAAGACGGC
AAGACGCCCT GGGAAGCCGT GCTGGAAGCC ACCCACCACC GCACCCGGCC GATCCTGCTG
ACGGCGGCGG CGGCCAGCCT GGGGATGATC CCCATCGCCC GCGAAGTGTT CTGGGGGCCG
ATGGCCTATG CGATGATCGG CGGCATCGTT GCCGCCACGC TGCTCACGCT GATCTTCCTG
CCGGCGCTGT ACGTCGCCTG GTACCGGATT CCGGAACCGG GACGCTGA
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| Protein sequence | MKGGFNLSDW ALRHQSLVWY LMAVSLVMGV FSYLNLGREE DPSFAIKTMV IQTRWPGATV
DDTLEQVTDR IEKKLEELDS LDYVKSYTRP GESTVFVYLK DTTKAGDIPD IWYQVRKKIS
DIQGEFPQGI QGPGFNDEFG DVFGSVYAFT ADGLDFRQLR DYVEKVRLDI RSVKDLGKVQ
MIGAQNEVIY LNFSTRKLAA LGLDQRQVVQ SLQAQNAVTP SGVVEAGPER ISVRTSGNFR
SEKDLQAVNL RVNDRFYRLS DLASISRDFV DPPTSLFRYK GEPAIGLAVA MKEGGNILEF
GEALNARMQE ITGELPVGVG VHQVSNQAQV VKKAVGGFTQ ALFEAVVIVL IVSFVSLGLR
AGLVVACSIP LVLAMVFVFM EYTDITMQRV SLGALIIALG LLVDDAMITV EMMITRLELG
DSLHDSATYA YTSTAFPMLT GTLVTVAGFV PIGLNASSAG EYTFTLFAVI AVALLLSWIV
AVLFAPVIAV HILPKTLKHK SEQKKGRIAE RFDSLLHLAM RRRWTTIFLT ALLFGVSLFL
MKFVQHQFFP SSDRPELLVD LNLPQNSSIH ETRAVMDRLE ATLKDDEDID HWSAYVGEGA
IRFYLPLDQQ LQNNFYGQLV IVTKDLEARE RVAARLRDRL RKDYVGISTY VQPLEMGPPV
GRPIQYRVSG PQIDKVREYA MGLAGVLDGN PNIGDIVYDW NEPGKMLKID IAQDKARQLG
LSSEDVAQIM NSVVTGSAVT QVRDDIYLVN VIGRAEDSER GSLETLESLQ IVTPSGTSIP
LKAFAKVSYE LEQPLVWRRD RKPTITVKAS LRGEIQPTDL VAKLAPEVKR FADGLPANYR
IEVGGTVEES GKAEGPIAKV VPLMLFLMAT FLMIQLQSVQ KLFLVASVAP LGLIGVVAAL
LPTGTPMGFV AILGILALIG IIIRNSVILV TQIDAFEKDG KTPWEAVLEA THHRTRPILL
TAAAASLGMI PIAREVFWGP MAYAMIGGIV AATLLTLIFL PALYVAWYRI PEPGR
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