| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_01890 |
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| Symbol | pcaQ |
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| ID | 4383552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 172662 |
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| End bp | 173489 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639322709 |
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| Product | transcriptional regulator PcaQ |
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| Protein accession | YP_788310 |
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| Protein GI | 116053873 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | [TIGR02424] pca operon transcription factor PcaQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.536002 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.885717 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGGTGT CGCAGCCGGC GATCTCCAAG ACCCTCAAGG AACTGGAGGA AATCCTCGGC
GCGCGCCTGT TCGAACGGAG CAAGGCCGGC GCCGAGCTGA CCGAGGCGGG CGTGACCTTC
CTGCGCTATG CCGGCCCCTG CGTGCAGGCC CTGCGCGACG GAGTGAACAC CCTGCGCGGT
CACGAGGCGC AGGTCGAGAC GGTGCGGGTC GGCGTGCTGT CGACGGTGGA GAGCCTGGTG
GTGCCCGAGG TGATCCGGCG CCTGCACCGG CGCCACGGTG CGCTGGTGGT CAGCGTCGCC
ACCGGCCCCA GCGCCTACCT GCTGGCGCAA CTGAAGGTCG GCGAGCTGGA CCTGGTGGTC
GGGCGGATGA CCGATAGCCC GGACATCCAG GGCCTGACCT TCGAGCACCT GTACAGCGAG
TCGATGATGC TGGTGGTGCG TCCCGGCCAC CCCTTGCTCG CCGCGCCCCT CGGCGTCCTG
CAGCGGCTGG CCGAATTCCC ACTGGTGCTG CCGCTGGCCG GCACCACCAT CCGCCGCCAC
GCCGACAGCC TGTTCGTGCA ATGGGGCATC CCGCTCGCCG GACAGCGCCT GGAGACCCTC
TCGCCGACCC TCAGCCGCAG CTATGTGTTG CGCAGCGAGG CGATCTGGGT GGCGCCGCGC
GACGCCGTGC GCCTGGACGT CGGCAACGGC GAGCTGGCCG AGCTGGACCT GGGTATCCGC
GAACCGGGCG GTTCGGTCGG GCTGTGCCAC AACGCGGCCT TGCCGTTGCC GCTGGGGGCG
CAATGGTTCA GCGCGGTGTT GCGCGAGGTG GCCGCCGAGT TGCACTGA
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| Protein sequence | MAVSQPAISK TLKELEEILG ARLFERSKAG AELTEAGVTF LRYAGPCVQA LRDGVNTLRG
HEAQVETVRV GVLSTVESLV VPEVIRRLHR RHGALVVSVA TGPSAYLLAQ LKVGELDLVV
GRMTDSPDIQ GLTFEHLYSE SMMLVVRPGH PLLAAPLGVL QRLAEFPLVL PLAGTTIRRH
ADSLFVQWGI PLAGQRLETL SPTLSRSYVL RSEAIWVAPR DAVRLDVGNG ELAELDLGIR
EPGGSVGLCH NAALPLPLGA QWFSAVLREV AAELH
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