Gene P9515_17271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9515_17271 
SymbolrpsH 
ID4719809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9515 
KingdomBacteria 
Replicon accessionNC_008817 
Strand
Start bp1522537 
End bp1522938 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content37% 
IMG OID640081421 
Product30S ribosomal protein S8 
Protein accessionYP_001012041 
Protein GI123966960 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0096] Ribosomal protein S8 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAATC ACGATCCTAT TTCAGATATG CTCACTCGGA TAAGAAATGC GAGTCAAAAA 
AAGCATACAT CAACATCAAT TCCAGCTTCT AGGATGATTC TTAGTATTGC TAAAGTTCTT
CAAAAAGAAG GTTTCATAGC GGATATTAAC GAAGAAGGAG AAGGCTATGA GTCAAAAATA
GTTCTAGGGC TTAAATATAG TGGGAAAAAT AGATTTCCTA CTATTAGATC AATGCAAAGA
GTTAGTAAAC CCGGATTAAG AGTTTATAAG AACACAAAGG GGTTGCCAAA AGTTCTTGGG
GGGCTTGGAG TTGCTATAGT ATCCACCTCA AAAGGTGTAA TGAGTGACCG CGATGCAAGA
AAACAAGGCA TCGGTGGAGA AGTTCTTTGT TATGTTTATT AA
 
Protein sequence
MSNHDPISDM LTRIRNASQK KHTSTSIPAS RMILSIAKVL QKEGFIADIN EEGEGYESKI 
VLGLKYSGKN RFPTIRSMQR VSKPGLRVYK NTKGLPKVLG GLGVAIVSTS KGVMSDRDAR
KQGIGGEVLC YVY