Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9515_14231 |
Symbol | lexA |
ID | 4718769 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9515 |
Kingdom | Bacteria |
Replicon accession | NC_008817 |
Strand | - |
Start bp | 1261473 |
End bp | 1262105 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640081110 |
Product | SOS function regulatory protein, LexA repressor |
Protein accession | YP_001011737 |
Protein GI | 123966656 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
TIGRFAM ID | [TIGR00498] SOS regulatory protein LexA |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.438746 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTATATTT GTTTTATGTT AAATACATCT CAAGATAATC TTACAGATGC TCAAAATGAG CTATATGAGT GGATAAAGGA GTATATGAAA GATTTTCAAC ATAGTCCATC AATAAGACAG ATGATGCAGG CGATGGGATT AAAATCTCCA GCTCCAATAC AAAGCCGTTT GAAGCATTTG CAAGAAAAGG GTTACATATC ATGGCAAGAA GGTAAAGCTA GAACACTTCA ACTAATAGAT GAAGTAATAG AGGGTATTCC TGTTATGGGA TCCGTTGCGG CAGGAGGCTT AATTGAAACT TATTCTGATG TTAATGAAAA CTTAGATATT TCTGAGGTCT TGAAAAAGAA AAATGTTTTT GCGTTAACTG TTAATGGAGA TTCAATGATT GATGCATGTA TCGCAGATGG TGATATGGTT TTGATGGAAC CTATTATAGA TTCAAACAGT CTAAGAAATG GAACGATTGT AAGTGCCATG GTTCCTGGTC TAGGAACAAC TTTAAAATAT TTTTCTAAGA GAGGAGCTAA AATATTTCTT GAAGCGGCAA ATCCAGCTTA TGAACCAATT GAATTGAACC TAGACCAAGT TGTTTTTCAG GGAAAACTTT TAGCTGTTTG GAGAAAAATT TAA
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Protein sequence | MYICFMLNTS QDNLTDAQNE LYEWIKEYMK DFQHSPSIRQ MMQAMGLKSP APIQSRLKHL QEKGYISWQE GKARTLQLID EVIEGIPVMG SVAAGGLIET YSDVNENLDI SEVLKKKNVF ALTVNGDSMI DACIADGDMV LMEPIIDSNS LRNGTIVSAM VPGLGTTLKY FSKRGAKIFL EAANPAYEPI ELNLDQVVFQ GKLLAVWRKI
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