| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9515_13681 |
|---|
| Symbol | gmd |
|---|
| ID | 4718804 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9515 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008817 |
|---|
| Strand | + |
|---|
| Start bp | 1201440 |
|---|
| End bp | 1202546 |
|---|
| Gene Length | 1107 bp |
|---|
| Protein Length | 368 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640081054 |
|---|
| Product | gdpmannose 4,6-dehydratase |
|---|
| Protein accession | YP_001011682 |
|---|
| Protein GI | 123966601 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1089] GDP-D-mannose dehydratase |
|---|
| TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.666814 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAA AAGCCTTAAT TACTGGAGTT ACCGGACAAG ATGGGAGTTA TCTAGTTGAA
TTTCTTTTAA ATAAAAAATA CGAAGTACAT GGAATAAAGA GGAGAAGTAG TAGCTTAAAC
ACGCGAAGGG TAGATCATCT ATATCAAGAT CCACATGAAA ATAATCCAAG ATTTTTTATG
CATTATGGTG ATCTAACTGA CAGTACAAAC TTAATAAGAC TTATACAAGA TATCTCCCCT
GATGAAATTT ATAATTTAGG TGCTCAAAGT CATGTAGCAG TTAGTTTTGA AACTCCCGAA
TATACTGCTA ATTGCGATGC TTTAGGCACC TTAAGAATAT TAGAGGCAGT TCGAGTATTA
GGTCTCTCAA AAAAAACAAA AATATATCAA GCCAGCACTA GTGAATTATA TGGTTTGGTT
CAGGAAACAC CTCAAAACGA AAAAACACCT TTCTATCCTA GAAGTCCATA TGGTGTTGCA
AAATTATATG CTTATTGGAT TACGATTAAT TATCGAGAAG CATATGGAAT GTACGCATGT
AACGGGATTC TTTTCAACCA TGAAAGCCCT AGGAGAGGAG AAACATTTAT CACGAGAAAA
ATCACAAGAG GGCTTGCGAG AATAGATGCT GGCCTTGAAA AACTTCTTTT CTTGGGAAAT
CTTAATTCAA AAAGGGATTG GGGACACGCA AGAGACTATG TGGAAATGCA ATGGCTAATG
CTTCAACAAA AGGAACCAAA AGATTATGTC ATATCAACTG GGAGAGCAGA AAGTATAAGA
AAATTTGCTG AGATAAGTGC ATCTTATCTT GGCTGGAGTG ATAAAGGAAA ACCTGGGATA
ATTTGGGAAG GAGAAGGTTT AAATGAAGTG GGAAGAAGAG CTGATACTAT GGAAATAGTT
ATCAAAGTTG ACCCCAGATA CTTTAGACCA ACTGAAGTTG AATTTCTTCT TGGTGAATCA
AAAAAAGCAT CTCTAGAATT AGGTTGGACT CCAAACACTT CATTAGAAGA ATTAGTAAAA
GAAATGATAG AATCTGATAA AGAAGAAGCT AGGAAAGACT CTCTATTGAA AAAATCAGGT
TTTCAAATAA ATAATTCCCA AGAATAA
|
|---|
| Protein sequence | MNKKALITGV TGQDGSYLVE FLLNKKYEVH GIKRRSSSLN TRRVDHLYQD PHENNPRFFM
HYGDLTDSTN LIRLIQDISP DEIYNLGAQS HVAVSFETPE YTANCDALGT LRILEAVRVL
GLSKKTKIYQ ASTSELYGLV QETPQNEKTP FYPRSPYGVA KLYAYWITIN YREAYGMYAC
NGILFNHESP RRGETFITRK ITRGLARIDA GLEKLLFLGN LNSKRDWGHA RDYVEMQWLM
LQQKEPKDYV ISTGRAESIR KFAEISASYL GWSDKGKPGI IWEGEGLNEV GRRADTMEIV
IKVDPRYFRP TEVEFLLGES KKASLELGWT PNTSLEELVK EMIESDKEEA RKDSLLKKSG
FQINNSQE
|
|---|
| |