Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9515_11931 |
Symbol | recD |
ID | 4718956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9515 |
Kingdom | Bacteria |
Replicon accession | NC_008817 |
Strand | - |
Start bp | 1049435 |
End bp | 1051126 |
Gene Length | 1692 bp |
Protein Length | 563 aa |
Translation table | 11 |
GC content | 23% |
IMG OID | 640080875 |
Product | exodeoxyribonuclease V 67 kD polypeptide |
Protein accession | YP_001011507 |
Protein GI | 123966426 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.271805 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATTATA AAAAACAAGA TATTGAAGAA TTTGAATATA TTCATATCTT TAATCTTCTA AAGGATATAC TTAAATTTAA TGAAAAAAAA TATGGAGATT ATGTTAAGGA CACATTAAAA ATATTATTAG AACTTGAGAA AAATGGTGAA ACCATAATAG ACGTAGATAA GACTGTAGTA GGTTTTGAAT TATTAAAAGA TGGATGGCCT AATATTCATT TAAAAGTTCT TAAGGATATA GGATTATTAA ATTCAGTTAA TTCCCCATTC GTATTTAATA ATAGAAAATT AACATTAGTA AAATGGTCTC GGAAAATAAA AAGAGTTCTT AATGCCTTCT TAAAAAAAAT AGACAAAATT GCAATAAATT CGAATAATGA TAATAAGCTT GATCAAATAA AAAATATTTT TAAAAGTTCA AATTTGGTTT TTTTGCAAGG AGGACCCGGT ACAGGCAAAA CAACTATGAT TATAAATTTT ATACTCTATT GCTTGAAAAG TGATACTTAT TTAAACATAG GACTTGCCGC ACCTACAGGT AAAGCAACAT CTCGACTTAA AGAATCTCTT AATCAACAAA AAGATATCCT TTTAAGTAAT AGTCTTGATC AAATAGAATG TCAAACTTTA CATAAATGGA TTTTCAATTC TAATAATAAA GCTATTGAAT TTAAATTTAA ATTAAAGGAA CTAGATATTT TCATAATTGA TGAAATGTCA ATGGTAAATA TTGATATAAT CGAAACAATT TTAGATTTAA TAGCTAAAGA TTGCAAAATC ATTCTTGTTG GAGATAGAAA TCAATTATCT CCAGTTAAAA ATTGTTCTAT ATGGAATTAT TTATTTGAAT ATTCTGATAA TAAATTAATA AATTCTTGTA TAGTTAATCT AAAAAAAACT TATAGAAATA GTGGGGATAT TTCATTACTT AGTAATCTTG TATTTAATAA TAATAATTCT TTATTTAATA AAAAGATCAA TGAATTAGAA AAAGAAAAAA AAATCAAAGA AATAAATATT TTAAAAAGTA ATAATACAAA TATTCCTATA GAGCTTTTGA ATATTATCAA AAATAATCTT TCAAAATTAA GAAAATCAAC ATCAAATTTA AGTAATAAAA AATATATTTT TGATAATAAT ATTGATAACT TAATATCCCA TGAAAAAGAT TTAGTTAATA AAATTTTATT TGATTTACAA AGTCATTTGA TTTTATGCGA AAAGAATACA GGAAATTGGA GTGTTGAAGA TATAAACGAT ACCGTTATTG GAAAAACAAA ACCTTATGAT TTTAAAAATC TTGAAGAAGG TTTACCAATT ATGTGTACTA AAAATAATTA TGAGCTTGGC ATATCAAATG GAGATATTGG AGTTTTAATT GGAAATAATG ATAATAGGAA ATACCTTTTT AGGAAGTTTA ATGATAATAA TGAGCTTGTT GTTCAGTTAA TAGACCCATC AAATTTAGAA AATATAGTTC CAGCAATTGC AATTACAATT CATAAATCCC AAGGGAGTGA ATCTGAGAAA GTAAGTATTT TATGGCTTAA AAAAACTAAA TTAGATGAAT CCATAAATAG CGATAAAAAA GAAAGTGAAA ATATATTCTT CAGGGATAAT TATGAGAAAA GATTGCTTTA TACAGCAATA ACTAGAGCCA AGAAACTTTT AGATATTTAT TATTTAAATT AA
|
Protein sequence | MNYKKQDIEE FEYIHIFNLL KDILKFNEKK YGDYVKDTLK ILLELEKNGE TIIDVDKTVV GFELLKDGWP NIHLKVLKDI GLLNSVNSPF VFNNRKLTLV KWSRKIKRVL NAFLKKIDKI AINSNNDNKL DQIKNIFKSS NLVFLQGGPG TGKTTMIINF ILYCLKSDTY LNIGLAAPTG KATSRLKESL NQQKDILLSN SLDQIECQTL HKWIFNSNNK AIEFKFKLKE LDIFIIDEMS MVNIDIIETI LDLIAKDCKI ILVGDRNQLS PVKNCSIWNY LFEYSDNKLI NSCIVNLKKT YRNSGDISLL SNLVFNNNNS LFNKKINELE KEKKIKEINI LKSNNTNIPI ELLNIIKNNL SKLRKSTSNL SNKKYIFDNN IDNLISHEKD LVNKILFDLQ SHLILCEKNT GNWSVEDIND TVIGKTKPYD FKNLEEGLPI MCTKNNYELG ISNGDIGVLI GNNDNRKYLF RKFNDNNELV VQLIDPSNLE NIVPAIAITI HKSQGSESEK VSILWLKKTK LDESINSDKK ESENIFFRDN YEKRLLYTAI TRAKKLLDIY YLN
|
| |