| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9515_10341 |
|---|
| Symbol | carA |
|---|
| ID | 4719099 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9515 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008817 |
|---|
| Strand | - |
|---|
| Start bp | 925357 |
|---|
| End bp | 926496 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 640080714 |
|---|
| Product | carbamoyl phosphate synthase small subunit |
|---|
| Protein accession | YP_001011348 |
|---|
| Protein GI | 123966267 |
|---|
| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
|---|
| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCATC CTTTTAAGAA AAATGCAAAA CTTGTTTTAA GTAACGGGAC TACTTTTTCT
GGTTATTCAT TTGGTGCCGT CGGTACAACT CTAGGCGAAA TTGTTTTTAA TACTGGTATG
ACTGGTTATC AAGAAGTAAT AACGGATCCA AGTTATTTTG GTCAAATACT AACATTTACA
TATCCTGAGA TAGGAAATAC AGGAATTAAT TTCGAAGATT CTGAATCAGA CAACTGTGTT
AAAGGATTAA TAGTTCGTAA TTACTCAAAT AATAATAGTA ATTGGAGATC CCAAATAAGC
CTAAATCAGT GGCTGATTGA TAATAATATT ATTGGACTTT ATGGAGTTGA TACGAGAGCA
CTTGTCAAAA TTTTAAGATC TAACGGTTCG ATGAATGGTC TTATAACTTC AGAAAATAAT
AATTTAGATA GTTGTCTTAA GCTTATTTCT AATGCTCCGG ATATGAATGG TTTAAATTTA
TCAAGAGAAG TTTCAACAAA GAATAATTAT TTTTGGAAAG AGACCACTAA GACAAGTTTT
GATATAAGAA AAAAGGATAT TGGTACAAAA AATAAATTAA AAATTGTGGC AATTGATTTT
GGTATCAAAA AATCAATTCT TAATAGATTA GTTTCACATG GATGTGAGGT ATTGGTATTG
CCTTCACATT CTTCTTTTGA AGATGTTTTA GGCAATAATC CTGATGGGAT ATTTTTTTCG
AATGGTCCAG GTGATCCTTC TACTGTTCTT GATGGGATTA ATTTAGCTAA ATCACTAATA
AATTATGGAA AAATTCCTAT GTTTGGAATT TGTCTTGGTC ATCAAATTTT TGGTTTGGCA
TTAGGAGGGG AAACATATAA ATTACCTTTT GGACATCGTG GTTTAAATCA TCCCTGTGGG
ATGAATAATA ATGTTGAAAT AACGAGTCAG AATCATGGTT TTGCCATAGA TCCAAATTCC
TTATCAAATG AAATTGTTGA AATAACTCAT CTTAACCTTA ATGATAAAAC TGTCGCTGGA
TTGAAACTTA AAAATAAGCC TATATTTAGT GTTCAATATC ACCCAGAGGC AAGCCCGGGA
CCTCACGACT CAGATTATTT ATTTGAAAAT TTTGTTTCTC TAATGTTAGA AAGATGTTGA
|
|---|
| Protein sequence | MNHPFKKNAK LVLSNGTTFS GYSFGAVGTT LGEIVFNTGM TGYQEVITDP SYFGQILTFT
YPEIGNTGIN FEDSESDNCV KGLIVRNYSN NNSNWRSQIS LNQWLIDNNI IGLYGVDTRA
LVKILRSNGS MNGLITSENN NLDSCLKLIS NAPDMNGLNL SREVSTKNNY FWKETTKTSF
DIRKKDIGTK NKLKIVAIDF GIKKSILNRL VSHGCEVLVL PSHSSFEDVL GNNPDGIFFS
NGPGDPSTVL DGINLAKSLI NYGKIPMFGI CLGHQIFGLA LGGETYKLPF GHRGLNHPCG
MNNNVEITSQ NHGFAIDPNS LSNEIVEITH LNLNDKTVAG LKLKNKPIFS VQYHPEASPG
PHDSDYLFEN FVSLMLERC
|
|---|
| |