| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9515_06421 |
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| Symbol | |
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| ID | 4719651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9515 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008817 |
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| Strand | - |
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| Start bp | 572604 |
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| End bp | 573527 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640080320 |
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| Product | type II alternative sigma-70 family RNA polymerase sigma factor |
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| Protein accession | YP_001010958 |
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| Protein GI | 123965877 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.515657 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGTTCAT TAAGCGATTT TCTTGGAGAA ATAGGTCGTC ATCAACTTTT GACACCCGAG
AAGGAACTCA CTATGGGAAG AAAAGTCCAA GAAATGGTTG TGTTAATTAA CAGATGTCAA
ACTGCGGGAG GCAAAGGCTC TGCTTGTGAA TATTCTGAAG TTGAAAAAAA GAAAATCAAA
ATTGGTGAAA AGGCTAAGAA TGCGATGATT ACAGCAAATC TTAGATTAGT GGTAAATCTT
GCGAAAAGAT ATCAAGGGAA GGGTTTAGAG TTATTAGACT TAATTCAAGA GGGTACTCTT
GGTCTTACAA GAGCTGTAGA AAAATACGAT CCTTCAAGAG GTCATAGATT CTCCACTTAT
GCTTACTGGT GGATAAGGCA GGGATTGAAT AGGGCTTTAT CAACTCAAAG CAGAACCATA
AGAATACCCG TAAATATAAA TGAAAAACTA ACAAAATTAA GAGCAGCAAA ATCTAAGCTA
ATGCAACTTA AAGGTTTTCC TCCAACTAGC TTTGAGCTGG CAGAAGAGAT GAAAATTACT
AAAGAAGAAA TTGATGAACT ACTTTCTTGT GAGTTAAGAA GCATCACAGT TAGTCTTCAA
GGCACTGTCA AGTCCAAGTC AGACCCATCT GAATTGGTTG ATATTCTTCC AAGTGATCAA
ACCCCTCCAA TGGAATTAGC AGAACTTGCA GAGAGAACAG CCTCTGCTTG GACACTATTA
GATAAAGCCA ACCTTACTGA AAAAGAAAGA AAAATAGTAA GTTTAAGATT TGGATTAGAT
GGCTCTAATG AATGGAAAAC TTTAGCTGAA GTTGCAAGAC ATATGAGTTG TAGTAGAGAG
TATTGTAGAC AAGTTGTACA AAGAGCCTTG AGAAAGCTTA GAAAAGCCGG AATTCAGAAT
GGACTTGTAG ATAGTGTTAG CTAA
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| Protein sequence | MSSLSDFLGE IGRHQLLTPE KELTMGRKVQ EMVVLINRCQ TAGGKGSACE YSEVEKKKIK
IGEKAKNAMI TANLRLVVNL AKRYQGKGLE LLDLIQEGTL GLTRAVEKYD PSRGHRFSTY
AYWWIRQGLN RALSTQSRTI RIPVNINEKL TKLRAAKSKL MQLKGFPPTS FELAEEMKIT
KEEIDELLSC ELRSITVSLQ GTVKSKSDPS ELVDILPSDQ TPPMELAELA ERTASAWTLL
DKANLTEKER KIVSLRFGLD GSNEWKTLAE VARHMSCSRE YCRQVVQRAL RKLRKAGIQN
GLVDSVS
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