| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9515_02991 |
|---|
| Symbol | purH |
|---|
| ID | 4720172 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9515 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008817 |
|---|
| Strand | - |
|---|
| Start bp | 275364 |
|---|
| End bp | 276917 |
|---|
| Gene Length | 1554 bp |
|---|
| Protein Length | 517 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640079964 |
|---|
| Product | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
|---|
| Protein accession | YP_001010615 |
|---|
| Protein GI | 123965534 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0138] AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) |
|---|
| TIGRFAM ID | [TIGR00355] phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCACCAT TAGCCCTAGT AAGTGTCTCT GATAAAACAA ATATCATTCC ATTTTGTAAG
GATTTAGTTG AAAAATTTGG TTATAATATT TTATCCAGCG GAGGGACCGC TGAGTACTTG
ACAGAGGCAA AAGTTCCTGT TCTTAAAGTA GCAGATTTTA CTGAATCTCC AGAGATTCTT
GACGGGAGAG TTAAAACTTT ACATCCAAAG ATTCATGGAG GAATTCTTGC TAAAAGATCT
AATGAAGAGC ATCAAAGGGA AATATTAGAA AACAAACTAG AATTGATTGA TTTGGTAGTT
GTTAATTTGT ATCCCTTTAA GAAAAAAGTG GAAGAGCAAT GTCCTTGGGA AGAAGCAATT
GAGAATATTG ATATAGGAGG TCCATCTATG ATACGCTCTG CAGCTAAAAA TCATGCTGAT
GTTGCAGTTT TAGTAGATCC TAATCAATAT CAAAATTATA TTGAAGAGAT CAAAAAAGGA
CCACTTAGCA AAGACTTTAA AACGAAATTA GCATTTGAGG CGTTTCAACA TACCGCAAGT
TATGACTCTG CAATATCAAA TTGGATTAGT AAAGAAAAGG ATTTAAGACC TTCGAATTTT
ATAGAATCAT ACCCGCTTAT AAAGCAATTA AGGTATGGAG AAAATCCCCA TCAAAAAGCA
TTATGGTATG GATTAAATAA TATTGGATGG AATTCAGCAG AACAATTACA AGGCAAAGAG
TTAAGCTATA ACAACATACT CGATCTTGAA TCAGCTCTAT TAACTGTATT AGAATTTGGA
TATGAAACAA AGCCTAACAT TAAGACCGAA TCAATAGCTG CAGTTATTCT CAAACATAAT
AATCCTTGTG GGGCTTCGAT TAGCAACTCA GCATCTAGTT CTTTTAAGAA TGCGTTAAAG
TGCGATTCAG TTAGTGCCTT TGGGGGCATA GTAGCATTTA ATGCCAATGT TGATAAAGAA
ACTGCCCTTA TTCTGAAAGA CATTTTTTTA GAGTGCGTAG TAGCACCATC CTTTGATAAA
GAAGCTTTAG AAATATTTAA AACCAAAAAG AATTTGAGAG TTTTAAAGTT AACAAAAGAA
ATGCTGCCTA AAGAAAACCA AACTTGTTCC AAATCAATTA TGGGAGGAAT ACTCATACAA
GATTCTGATA ATCAGGAAAA TTCAGAAGAT TCTTGGATTT CAGTAACCAA AAAGAATCCA
ACTGAACAGG AATATTTAGA TTTGAAATTT GCTTGGAAAA TTTGTAAACA TGTTAAGTCG
AACGCTATTG TAGTTGCAAA AGATCAACAA ACTCTTGGCA TAGGAGCTGG GCAAATGAAT
AGAGTTGGGG CTTCAAAAAT AGCTTTAGAA GCAGCTAAAG AAATTGATTC TGGAGGGGTT
TTAGCAAGCG ATGGTTTTTT CCCGTTCGCA GATACAGTGC GACTTGCAGA TAAGTATGGA
ATAAGTTCTA TTATTCAGCC GGGAGGTAGT ATAAGAGATG AAGAAAGCAT AAAAATGTGT
GATTCAAGGG GTATTTCCAT GATATTTACC CACAAAAGAC ACTTTTTACA TTAA
|
|---|
| Protein sequence | MSPLALVSVS DKTNIIPFCK DLVEKFGYNI LSSGGTAEYL TEAKVPVLKV ADFTESPEIL
DGRVKTLHPK IHGGILAKRS NEEHQREILE NKLELIDLVV VNLYPFKKKV EEQCPWEEAI
ENIDIGGPSM IRSAAKNHAD VAVLVDPNQY QNYIEEIKKG PLSKDFKTKL AFEAFQHTAS
YDSAISNWIS KEKDLRPSNF IESYPLIKQL RYGENPHQKA LWYGLNNIGW NSAEQLQGKE
LSYNNILDLE SALLTVLEFG YETKPNIKTE SIAAVILKHN NPCGASISNS ASSSFKNALK
CDSVSAFGGI VAFNANVDKE TALILKDIFL ECVVAPSFDK EALEIFKTKK NLRVLKLTKE
MLPKENQTCS KSIMGGILIQ DSDNQENSED SWISVTKKNP TEQEYLDLKF AWKICKHVKS
NAIVVAKDQQ TLGIGAGQMN RVGASKIALE AAKEIDSGGV LASDGFFPFA DTVRLADKYG
ISSIIQPGGS IRDEESIKMC DSRGISMIFT HKRHFLH
|
|---|
| |