Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9515_01091 |
Symbol | |
ID | 4720244 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9515 |
Kingdom | Bacteria |
Replicon accession | NC_008817 |
Strand | - |
Start bp | 109136 |
End bp | 110566 |
Gene Length | 1431 bp |
Protein Length | 476 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 640079771 |
Product | RND family outer membrane efflux protein |
Protein accession | YP_001010425 |
Protein GI | 123965344 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTTAGAA AACTTATACA TCCAGTCTTA TTTTTTCCAC TTTTTTTATT TATTAATTCT CAAAAAGCAG TATTAAGTGG CTCTAACAAT AATATTGAAG CAATCCTAGA AGAAAACGAA ACCCAAATAT TCCTTAATTA TTCAGAAATA AAAAATATTA CTTTAAAAAA TAATCAAGAA CTTAAGGCAT TAGAAAATCT AGTCGATTCA TCGACTTTTA CTCTTTCGAG TAAAATTGCT AAAAGATATC CTTCATTAGA TTTGCAAGCC AGTGGATTTC CAAAATATGT TTCAGGAAAA AACTATAACA GTACCTCATC AACTACGAAG ACCTCTCAAT TCTCTGCAAA TCCATCCCTT AATATTAGAT TAGACTTAAT AGATCCTTTA AGAGGATCTG AAATTCAAAT AGCTAAAAAT AATTATGCGA TAGCAAGAAA TAATTATGAG ATTAAAAAGA AAGACCTCAT TCAAGAAGCA AAATCTAGAT ACCACAAACT ACAAAAATCT TATCAAGATA TTAAAAACAA AAAATCCTCT CTTGATTTAT CAGTTACTAG TTTGAAAGAT GCTAAGTCTA AATTTGATGC GGGTATAGGC ACTAAATTTG AAGTTCTAGA AGCTAATGCA CAATTATCTA GAGATAGGCA AACACTAAAT GAAAAAAAAA TTCAAAATCA GATCAACAAA ATTGCACTTA AAGAAATCTT AAATATAAAT GGTGATTTCG ACATAAATAA AAAGCAAAAA TTAATAGGTT TCTGGAACCA CAAATTAAAT AAGAACATAA ATGAAGGTTT ACTTAAGAGT CTTTCTCTGA AAAATATTAC TCTTCAAAAA GCAATCAAAG AAAATCAAGC AAAAAATTAT CTAAACACTT ATAAACCAAA TGTTTATATA AGTAATGTAT TAACTACTTC ATTTTCAAAG GGTGATTCTT TAGCAGTCCA AATAGATTCT GGAAAATCTG GATCTGCCTA TACAAATACT GTCAGCTTAA ACTTTGGTTG GAATATTTTT GATGGTGGGC AAAATAAAAA TTTATATAAA TCAAGCATAG CCGATGCTCA ATCAGAAGAT TACTCTTATA GAAATCTTGA AAATGTTATT AAATCCAAAA TTAGTAAAGC TTATTTGAAT TTAAAATTAA ATGAAGAAAA AATTATATCC TCTCTAGAAG AAATATCTTC TACAGAAGAA TCTCTAAGAC TAGCAAGATT AAGATATGAG GTAGGAATAT CGACATTGAA AGATGTTCTT GTAAGACAAA AAGAATTGAG TAATGCTAAT TCAAAAAATA TTGATGCAAT TTATAATTAC AATTTAAATT TGGATGAATT AGAGAGATTG ACTTATCTTG AGATAAGTAA TATTTGTGAT GAAAGCAATG GTTTCATAAA TAATGATATT AAATCTATTT GCAATATTTG A
|
Protein sequence | MLRKLIHPVL FFPLFLFINS QKAVLSGSNN NIEAILEENE TQIFLNYSEI KNITLKNNQE LKALENLVDS STFTLSSKIA KRYPSLDLQA SGFPKYVSGK NYNSTSSTTK TSQFSANPSL NIRLDLIDPL RGSEIQIAKN NYAIARNNYE IKKKDLIQEA KSRYHKLQKS YQDIKNKKSS LDLSVTSLKD AKSKFDAGIG TKFEVLEANA QLSRDRQTLN EKKIQNQINK IALKEILNIN GDFDINKKQK LIGFWNHKLN KNINEGLLKS LSLKNITLQK AIKENQAKNY LNTYKPNVYI SNVLTTSFSK GDSLAVQIDS GKSGSAYTNT VSLNFGWNIF DGGQNKNLYK SSIADAQSED YSYRNLENVI KSKISKAYLN LKLNEEKIIS SLEEISSTEE SLRLARLRYE VGISTLKDVL VRQKELSNAN SKNIDAIYNY NLNLDELERL TYLEISNICD ESNGFINNDI KSICNI
|
| |