Gene P9515_01091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9515_01091 
Symbol 
ID4720244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9515 
KingdomBacteria 
Replicon accessionNC_008817 
Strand
Start bp109136 
End bp110566 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content27% 
IMG OID640079771 
ProductRND family outer membrane efflux protein 
Protein accessionYP_001010425 
Protein GI123965344 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTAGAA AACTTATACA TCCAGTCTTA TTTTTTCCAC TTTTTTTATT TATTAATTCT 
CAAAAAGCAG TATTAAGTGG CTCTAACAAT AATATTGAAG CAATCCTAGA AGAAAACGAA
ACCCAAATAT TCCTTAATTA TTCAGAAATA AAAAATATTA CTTTAAAAAA TAATCAAGAA
CTTAAGGCAT TAGAAAATCT AGTCGATTCA TCGACTTTTA CTCTTTCGAG TAAAATTGCT
AAAAGATATC CTTCATTAGA TTTGCAAGCC AGTGGATTTC CAAAATATGT TTCAGGAAAA
AACTATAACA GTACCTCATC AACTACGAAG ACCTCTCAAT TCTCTGCAAA TCCATCCCTT
AATATTAGAT TAGACTTAAT AGATCCTTTA AGAGGATCTG AAATTCAAAT AGCTAAAAAT
AATTATGCGA TAGCAAGAAA TAATTATGAG ATTAAAAAGA AAGACCTCAT TCAAGAAGCA
AAATCTAGAT ACCACAAACT ACAAAAATCT TATCAAGATA TTAAAAACAA AAAATCCTCT
CTTGATTTAT CAGTTACTAG TTTGAAAGAT GCTAAGTCTA AATTTGATGC GGGTATAGGC
ACTAAATTTG AAGTTCTAGA AGCTAATGCA CAATTATCTA GAGATAGGCA AACACTAAAT
GAAAAAAAAA TTCAAAATCA GATCAACAAA ATTGCACTTA AAGAAATCTT AAATATAAAT
GGTGATTTCG ACATAAATAA AAAGCAAAAA TTAATAGGTT TCTGGAACCA CAAATTAAAT
AAGAACATAA ATGAAGGTTT ACTTAAGAGT CTTTCTCTGA AAAATATTAC TCTTCAAAAA
GCAATCAAAG AAAATCAAGC AAAAAATTAT CTAAACACTT ATAAACCAAA TGTTTATATA
AGTAATGTAT TAACTACTTC ATTTTCAAAG GGTGATTCTT TAGCAGTCCA AATAGATTCT
GGAAAATCTG GATCTGCCTA TACAAATACT GTCAGCTTAA ACTTTGGTTG GAATATTTTT
GATGGTGGGC AAAATAAAAA TTTATATAAA TCAAGCATAG CCGATGCTCA ATCAGAAGAT
TACTCTTATA GAAATCTTGA AAATGTTATT AAATCCAAAA TTAGTAAAGC TTATTTGAAT
TTAAAATTAA ATGAAGAAAA AATTATATCC TCTCTAGAAG AAATATCTTC TACAGAAGAA
TCTCTAAGAC TAGCAAGATT AAGATATGAG GTAGGAATAT CGACATTGAA AGATGTTCTT
GTAAGACAAA AAGAATTGAG TAATGCTAAT TCAAAAAATA TTGATGCAAT TTATAATTAC
AATTTAAATT TGGATGAATT AGAGAGATTG ACTTATCTTG AGATAAGTAA TATTTGTGAT
GAAAGCAATG GTTTCATAAA TAATGATATT AAATCTATTT GCAATATTTG A
 
Protein sequence
MLRKLIHPVL FFPLFLFINS QKAVLSGSNN NIEAILEENE TQIFLNYSEI KNITLKNNQE 
LKALENLVDS STFTLSSKIA KRYPSLDLQA SGFPKYVSGK NYNSTSSTTK TSQFSANPSL
NIRLDLIDPL RGSEIQIAKN NYAIARNNYE IKKKDLIQEA KSRYHKLQKS YQDIKNKKSS
LDLSVTSLKD AKSKFDAGIG TKFEVLEANA QLSRDRQTLN EKKIQNQINK IALKEILNIN
GDFDINKKQK LIGFWNHKLN KNINEGLLKS LSLKNITLQK AIKENQAKNY LNTYKPNVYI
SNVLTTSFSK GDSLAVQIDS GKSGSAYTNT VSLNFGWNIF DGGQNKNLYK SSIADAQSED
YSYRNLENVI KSKISKAYLN LKLNEEKIIS SLEEISSTEE SLRLARLRYE VGISTLKDVL
VRQKELSNAN SKNIDAIYNY NLNLDELERL TYLEISNICD ESNGFINNDI KSICNI