Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9303_26651 |
Symbol | pds |
ID | 4777381 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9303 |
Kingdom | Bacteria |
Replicon accession | NC_008820 |
Strand | - |
Start bp | 2351859 |
End bp | 2353277 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640088188 |
Product | phytoene desaturase |
Protein accession | YP_001018660 |
Protein GI | 124024353 |
COG category | [S] Function unknown |
COG ID | [COG3349] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR02731] phytoene desaturase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGTTG CCATCGCAGG AGCAGGTCTG GCTGGACTCT CATGTGCCAA ATATCTAGTT GATGCGGGAC ATATTCCAGT TGTTTATGAG TCCCGCGATG TGCTTGGGGG CAAAGTTGCG GCTTGGAAGG ATGAGGATGG TGACTGGTAT GAGACTGGTT TACATATCTT TTTTGGGGCT TATCCAAATA TGCTCCAGTT GTTCCACGAA TTGGGCATTG AGGAGCGTTT GCAGTGGAAA AGTCACTCGA TGATCTTCAA CCAGCTTGAG GAGCCTGGAA CATATAGCCG CTTTGACTTT CCTGATCTTC CAGCTCCATT CAATGGAGTG GCTGCCATTT TAGGTAATAA CGATCTGCTC AGCTGGCCAG AGAAGGTTGC CTTCGGCTTG GGTCTCGTAC CGGCAATGTT GCGAGGCCAG GATTACGTGG AGGAGTGTGA TCAATATTCT TGGACTGAAT GGCTGAGGAT CCACAACATC CCTGAGCGGG TGAATGAGGA GGTTTTCATC GCCATGAGTA AGGCATTGAA CTTTATTGAC CCTGATGAGA TTTCAGCCAC TGTCATCCTC ACGGCGCTCA ATCGATTTCT TCAGGAAAAG AATGGTTCCA AGATGGCCTT CCTTGATGGG GCCCCTCCTG AGCGGCTTTG TCAACCGATG GTGGAGCATA TTCAGTCTCA TGGTGGCGAG GTTTATCTCA ACAGCCCTTT GCGGGAGATC AAGCTCAGTG AAGACAGCAG TGTGGAGAGC TTTTTGATCG GAGGTGAGCC GGGTAGTGAA TCTAGGCATG TTCAAGCCGA TGCTTATGTC AGTGCTCTTC CTGTGGATCC GCTCAAATTG CTTTTGCCGG CCCCTTGGAA GCAGATGGAG GTGTTTCGCA AACTCGACGG ATTGCGCGGT GTTCCAGTGA TCAACATTCA TCTCTGGTTC GACCGCAAGC TCACGGATAT CGATCACCTG CTCTTCAGTC GTTCCCCTCT TTTGAGTGTC TACGCCGATA TGAGCATTAC CTGCAAGGAG TACGCAGATC CAGATCGCTC TATGTTGGAA CTGGTCTTTG CTCCAGCCAA AGATTGGATC GGCCGTAGCG ATGACGACAT CATCGAAGCC ACATTGGCTG AGCTCAAGAA GCTTTTCCCG ATGCACTTCA CAGGCGAAAA ACAGGCCAAA CTGCGCAAGT ACAAGGTCAT CAAGACACCT CTTTCGGTTT ATAAGACCAC CCCTGGGTGT CAGAAGCTTC GCCCGAGCCA GGAGACTCCG ATTGCCAACT TTTTTCTCGC TGGTGACTTC ACAATGCAGC GATACCTGGC GTCGATGGAG GGTGCGGTGC TCAGTGGCAA GTTGTGTGCA AACGCCGTGG ATAGCTGTGG GGAGAAGTTA TCCACGCCCC AGTCTGTTAG CAAGCCTCTC CAGGCCTGA
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Protein sequence | MRVAIAGAGL AGLSCAKYLV DAGHIPVVYE SRDVLGGKVA AWKDEDGDWY ETGLHIFFGA YPNMLQLFHE LGIEERLQWK SHSMIFNQLE EPGTYSRFDF PDLPAPFNGV AAILGNNDLL SWPEKVAFGL GLVPAMLRGQ DYVEECDQYS WTEWLRIHNI PERVNEEVFI AMSKALNFID PDEISATVIL TALNRFLQEK NGSKMAFLDG APPERLCQPM VEHIQSHGGE VYLNSPLREI KLSEDSSVES FLIGGEPGSE SRHVQADAYV SALPVDPLKL LLPAPWKQME VFRKLDGLRG VPVINIHLWF DRKLTDIDHL LFSRSPLLSV YADMSITCKE YADPDRSMLE LVFAPAKDWI GRSDDDIIEA TLAELKKLFP MHFTGEKQAK LRKYKVIKTP LSVYKTTPGC QKLRPSQETP IANFFLAGDF TMQRYLASME GAVLSGKLCA NAVDSCGEKL STPQSVSKPL QA
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