Gene P9303_26651 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9303_26651 
Symbolpds 
ID4777381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9303 
KingdomBacteria 
Replicon accessionNC_008820 
Strand
Start bp2351859 
End bp2353277 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content51% 
IMG OID640088188 
Productphytoene desaturase 
Protein accessionYP_001018660 
Protein GI124024353 
COG category[S] Function unknown 
COG ID[COG3349] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02731] phytoene desaturase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGTTG CCATCGCAGG AGCAGGTCTG GCTGGACTCT CATGTGCCAA ATATCTAGTT 
GATGCGGGAC ATATTCCAGT TGTTTATGAG TCCCGCGATG TGCTTGGGGG CAAAGTTGCG
GCTTGGAAGG ATGAGGATGG TGACTGGTAT GAGACTGGTT TACATATCTT TTTTGGGGCT
TATCCAAATA TGCTCCAGTT GTTCCACGAA TTGGGCATTG AGGAGCGTTT GCAGTGGAAA
AGTCACTCGA TGATCTTCAA CCAGCTTGAG GAGCCTGGAA CATATAGCCG CTTTGACTTT
CCTGATCTTC CAGCTCCATT CAATGGAGTG GCTGCCATTT TAGGTAATAA CGATCTGCTC
AGCTGGCCAG AGAAGGTTGC CTTCGGCTTG GGTCTCGTAC CGGCAATGTT GCGAGGCCAG
GATTACGTGG AGGAGTGTGA TCAATATTCT TGGACTGAAT GGCTGAGGAT CCACAACATC
CCTGAGCGGG TGAATGAGGA GGTTTTCATC GCCATGAGTA AGGCATTGAA CTTTATTGAC
CCTGATGAGA TTTCAGCCAC TGTCATCCTC ACGGCGCTCA ATCGATTTCT TCAGGAAAAG
AATGGTTCCA AGATGGCCTT CCTTGATGGG GCCCCTCCTG AGCGGCTTTG TCAACCGATG
GTGGAGCATA TTCAGTCTCA TGGTGGCGAG GTTTATCTCA ACAGCCCTTT GCGGGAGATC
AAGCTCAGTG AAGACAGCAG TGTGGAGAGC TTTTTGATCG GAGGTGAGCC GGGTAGTGAA
TCTAGGCATG TTCAAGCCGA TGCTTATGTC AGTGCTCTTC CTGTGGATCC GCTCAAATTG
CTTTTGCCGG CCCCTTGGAA GCAGATGGAG GTGTTTCGCA AACTCGACGG ATTGCGCGGT
GTTCCAGTGA TCAACATTCA TCTCTGGTTC GACCGCAAGC TCACGGATAT CGATCACCTG
CTCTTCAGTC GTTCCCCTCT TTTGAGTGTC TACGCCGATA TGAGCATTAC CTGCAAGGAG
TACGCAGATC CAGATCGCTC TATGTTGGAA CTGGTCTTTG CTCCAGCCAA AGATTGGATC
GGCCGTAGCG ATGACGACAT CATCGAAGCC ACATTGGCTG AGCTCAAGAA GCTTTTCCCG
ATGCACTTCA CAGGCGAAAA ACAGGCCAAA CTGCGCAAGT ACAAGGTCAT CAAGACACCT
CTTTCGGTTT ATAAGACCAC CCCTGGGTGT CAGAAGCTTC GCCCGAGCCA GGAGACTCCG
ATTGCCAACT TTTTTCTCGC TGGTGACTTC ACAATGCAGC GATACCTGGC GTCGATGGAG
GGTGCGGTGC TCAGTGGCAA GTTGTGTGCA AACGCCGTGG ATAGCTGTGG GGAGAAGTTA
TCCACGCCCC AGTCTGTTAG CAAGCCTCTC CAGGCCTGA
 
Protein sequence
MRVAIAGAGL AGLSCAKYLV DAGHIPVVYE SRDVLGGKVA AWKDEDGDWY ETGLHIFFGA 
YPNMLQLFHE LGIEERLQWK SHSMIFNQLE EPGTYSRFDF PDLPAPFNGV AAILGNNDLL
SWPEKVAFGL GLVPAMLRGQ DYVEECDQYS WTEWLRIHNI PERVNEEVFI AMSKALNFID
PDEISATVIL TALNRFLQEK NGSKMAFLDG APPERLCQPM VEHIQSHGGE VYLNSPLREI
KLSEDSSVES FLIGGEPGSE SRHVQADAYV SALPVDPLKL LLPAPWKQME VFRKLDGLRG
VPVINIHLWF DRKLTDIDHL LFSRSPLLSV YADMSITCKE YADPDRSMLE LVFAPAKDWI
GRSDDDIIEA TLAELKKLFP MHFTGEKQAK LRKYKVIKTP LSVYKTTPGC QKLRPSQETP
IANFFLAGDF TMQRYLASME GAVLSGKLCA NAVDSCGEKL STPQSVSKPL QA